Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cpne3Q8BT60 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Rcor1-201ENSMUST00000084968 5684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Gm12366-201ENSMUST00000121722 873 ntBASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Gm5786-201ENSMUST00000085368 882 ntBASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cpne3Q8BT60 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC20.21■□□□□ 0.83
Cpne3Q8BT60 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC20.21■□□□□ 0.83
Cpne3Q8BT60 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne3Q8BT60 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cpne3Q8BT60 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Cpne3Q8BT60 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Slc9a2-201ENSMUST00000027231 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cpne3Q8BT60 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Zfp598-201ENSMUST00000047179 3286 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cpne3Q8BT60 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne3Q8BT60 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne3Q8BT60 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne3Q8BT60 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne3Q8BT60 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne3Q8BT60 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cpne3Q8BT60 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cpne3Q8BT60 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cpne3Q8BT60 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Srsf12-201ENSMUST00000067864 2939 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cpne3Q8BT60 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC20.14■□□□□ 0.82
Cpne3Q8BT60 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne3Q8BT60 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne3Q8BT60 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne3Q8BT60 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne3Q8BT60 Gm10420-201ENSMUST00000121713 882 ntBASIC20.14■□□□□ 0.81
Cpne3Q8BT60 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cpne3Q8BT60 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC20.13■□□□□ 0.81
Cpne3Q8BT60 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne3Q8BT60 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne3Q8BT60 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.13■□□□□ 0.81
Cpne3Q8BT60 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne3Q8BT60 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cpne3Q8BT60 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.12■□□□□ 0.81
Cpne3Q8BT60 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms