Protein–RNA interactions for Protein: Q8BL06

Usp54, Inactive ubiquitin carboxyl-terminal hydrolase 54, mousemouse

Known RBP Predictions only

Length 1,588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp54Q8BL06 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC30.77■■■□□ 2.52
Usp54Q8BL06 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
Usp54Q8BL06 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Usp54Q8BL06 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Usp54Q8BL06 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Usp54Q8BL06 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
Usp54Q8BL06 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
Usp54Q8BL06 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Usp54Q8BL06 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
Usp54Q8BL06 Gm18284-201ENSMUST00000172604 624 ntBASIC30.76■■■□□ 2.52
Usp54Q8BL06 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
Usp54Q8BL06 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC30.75■■■□□ 2.51
Usp54Q8BL06 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC30.75■■■□□ 2.51
Usp54Q8BL06 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC30.75■■■□□ 2.51
Usp54Q8BL06 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
Usp54Q8BL06 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Usp54Q8BL06 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Usp54Q8BL06 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
Usp54Q8BL06 Gm9870-201ENSMUST00000063874 645 ntBASIC30.74■■■□□ 2.51
Usp54Q8BL06 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
Usp54Q8BL06 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
Usp54Q8BL06 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
Usp54Q8BL06 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
Usp54Q8BL06 Gm43137-201ENSMUST00000198052 594 ntBASIC30.72■■■□□ 2.51
Usp54Q8BL06 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC30.72■■■□□ 2.51
Usp54Q8BL06 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC30.72■■■□□ 2.51
Usp54Q8BL06 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
Usp54Q8BL06 Gm43017-201ENSMUST00000198296 752 ntBASIC30.71■■■□□ 2.51
Usp54Q8BL06 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
Usp54Q8BL06 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC30.71■■■□□ 2.51
Usp54Q8BL06 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Usp54Q8BL06 Krt8-ps-201ENSMUST00000208495 945 ntBASIC30.7■■■□□ 2.5
Usp54Q8BL06 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
Usp54Q8BL06 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Usp54Q8BL06 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
Usp54Q8BL06 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC30.69■■■□□ 2.5
Usp54Q8BL06 Gm10657-201ENSMUST00000193528 1031 ntBASIC30.69■■■□□ 2.5
Usp54Q8BL06 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC30.68■■■□□ 2.5
Usp54Q8BL06 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
Usp54Q8BL06 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC30.67■■■□□ 2.5
Usp54Q8BL06 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC30.67■■■□□ 2.5
Usp54Q8BL06 Gm5297-201ENSMUST00000198555 1171 ntBASIC30.67■■■□□ 2.5
Usp54Q8BL06 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
Usp54Q8BL06 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
Usp54Q8BL06 Gm12251-201ENSMUST00000117893 792 ntBASIC30.66■■■□□ 2.5
Usp54Q8BL06 Gm8495-201ENSMUST00000188740 694 ntBASIC30.66■■■□□ 2.5
Usp54Q8BL06 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
Usp54Q8BL06 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Rtn4-210ENSMUST00000170731 1272 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Usp54Q8BL06 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC30.65■■■□□ 2.5
Usp54Q8BL06 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
Usp54Q8BL06 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Usp54Q8BL06 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
Usp54Q8BL06 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC30.64■■■□□ 2.5
Usp54Q8BL06 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC30.63■■■□□ 2.49
Usp54Q8BL06 Kdm3b-204ENSMUST00000224715 2032 ntBASIC30.63■■■□□ 2.49
Usp54Q8BL06 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC30.63■■■□□ 2.49
Usp54Q8BL06 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Usp54Q8BL06 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
Usp54Q8BL06 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC30.63■■■□□ 2.49
Usp54Q8BL06 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC30.62■■■□□ 2.49
Usp54Q8BL06 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Usp54Q8BL06 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Usp54Q8BL06 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Usp54Q8BL06 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
Usp54Q8BL06 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
Usp54Q8BL06 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Usp54Q8BL06 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
Usp54Q8BL06 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
Usp54Q8BL06 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
Usp54Q8BL06 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC30.6■■■□□ 2.49
Usp54Q8BL06 Gm8770-201ENSMUST00000121113 1109 ntBASIC30.6■■■□□ 2.49
Usp54Q8BL06 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
Usp54Q8BL06 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC30.6■■■□□ 2.49
Usp54Q8BL06 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC30.6■■■□□ 2.49
Usp54Q8BL06 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC30.59■■■□□ 2.49
Usp54Q8BL06 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Usp54Q8BL06 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Usp54Q8BL06 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp54Q8BL06 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp54Q8BL06 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
Usp54Q8BL06 Flvcr1-202ENSMUST00000191946 1216 ntBASIC30.58■■■□□ 2.49
Usp54Q8BL06 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC30.57■■■□□ 2.48
Retrieved 100 of 76,532 protein–RNA pairs in 11.5 ms