Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Smg1Q8BKX6 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC18.19■□□□□ 0.5
Smg1Q8BKX6 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smg1Q8BKX6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smg1Q8BKX6 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC18.19■□□□□ 0.5
Smg1Q8BKX6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Smg1Q8BKX6 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Smg1Q8BKX6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Smg1Q8BKX6 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Gm42569-201ENSMUST00000200539 472 ntBASIC18.17■□□□□ 0.5
Smg1Q8BKX6 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg1Q8BKX6 Gm43137-201ENSMUST00000198052 594 ntBASIC18.16■□□□□ 0.5
Smg1Q8BKX6 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg1Q8BKX6 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg1Q8BKX6 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Smg1Q8BKX6 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Mir7075-201ENSMUST00000184187 82 ntBASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Smg1Q8BKX6 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smg1Q8BKX6 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
Smg1Q8BKX6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smg1Q8BKX6 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
Smg1Q8BKX6 AC117245.4-201ENSMUST00000217388 1646 ntBASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 F930015N05Rik-201ENSMUST00000177999 1498 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Smg1Q8BKX6 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smg1Q8BKX6 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Smg1Q8BKX6 Gm42642-201ENSMUST00000200683 355 ntBASIC18.12■□□□□ 0.49
Smg1Q8BKX6 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smg1Q8BKX6 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smg1Q8BKX6 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Smg1Q8BKX6 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Gm43173-201ENSMUST00000202246 593 ntBASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Smg1Q8BKX6 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Smg1Q8BKX6 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Smg1Q8BKX6 Slc25a41-201ENSMUST00000058661 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 76.9 ms