Protein–RNA interactions for Protein: Q8BJ37

Tdp1, Tyrosyl-DNA phosphodiesterase 1, mousemouse

Predictions only

Length 609 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tdp1Q8BJ37 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC23.46■■□□□ 1.35
Tdp1Q8BJ37 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC23.46■■□□□ 1.35
Tdp1Q8BJ37 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC23.46■■□□□ 1.35
Tdp1Q8BJ37 Gm9207-201ENSMUST00000198773 1115 ntBASIC23.46■■□□□ 1.35
Tdp1Q8BJ37 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Tdp1Q8BJ37 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC23.45■■□□□ 1.35
Tdp1Q8BJ37 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC23.45■■□□□ 1.34
Tdp1Q8BJ37 Gm9870-201ENSMUST00000063874 645 ntBASIC23.44■■□□□ 1.34
Tdp1Q8BJ37 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tdp1Q8BJ37 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Tdp1Q8BJ37 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp1Q8BJ37 Pdcd5-201ENSMUST00000118501 684 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp1Q8BJ37 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp1Q8BJ37 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp1Q8BJ37 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp1Q8BJ37 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC23.43■■□□□ 1.34
Tdp1Q8BJ37 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC23.42■■□□□ 1.34
Tdp1Q8BJ37 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tdp1Q8BJ37 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tdp1Q8BJ37 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Tdp1Q8BJ37 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp1Q8BJ37 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC23.41■■□□□ 1.34
Tdp1Q8BJ37 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC23.41■■□□□ 1.34
Tdp1Q8BJ37 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp1Q8BJ37 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.41■■□□□ 1.34
Tdp1Q8BJ37 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.41■■□□□ 1.34
Tdp1Q8BJ37 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 AC115037.1-201ENSMUST00000223391 2173 ntBASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC23.4■■□□□ 1.34
Tdp1Q8BJ37 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC23.39■■□□□ 1.34
Tdp1Q8BJ37 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Tdp1Q8BJ37 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Tdp1Q8BJ37 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC23.39■■□□□ 1.33
Tdp1Q8BJ37 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC23.39■■□□□ 1.33
Tdp1Q8BJ37 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Tdp1Q8BJ37 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC23.39■■□□□ 1.33
Tdp1Q8BJ37 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Tdp1Q8BJ37 H3f3aos-201ENSMUST00000097448 2905 ntBASIC23.39■■□□□ 1.33
Tdp1Q8BJ37 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tdp1Q8BJ37 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tdp1Q8BJ37 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC23.38■■□□□ 1.33
Tdp1Q8BJ37 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Tdp1Q8BJ37 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Tdp1Q8BJ37 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Tdp1Q8BJ37 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
Tdp1Q8BJ37 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp1Q8BJ37 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp1Q8BJ37 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp1Q8BJ37 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp1Q8BJ37 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp1Q8BJ37 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Tdp1Q8BJ37 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
Tdp1Q8BJ37 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tdp1Q8BJ37 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Tdp1Q8BJ37 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Tdp1Q8BJ37 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC23.33■■□□□ 1.32
Tdp1Q8BJ37 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Tdp1Q8BJ37 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tdp1Q8BJ37 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.32■■□□□ 1.32
Tdp1Q8BJ37 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.32■■□□□ 1.32
Tdp1Q8BJ37 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Tdp1Q8BJ37 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tdp1Q8BJ37 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tdp1Q8BJ37 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tdp1Q8BJ37 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC23.31■■□□□ 1.32
Tdp1Q8BJ37 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC23.31■■□□□ 1.32
Tdp1Q8BJ37 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC23.31■■□□□ 1.32
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms