Protein–RNA interactions for Protein: Q8BIZ0

Pcdh20, Protocadherin-20, mousemouse

Predictions only

Length 952 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh20Q8BIZ0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Mbnl3-203ENSMUST00000114876 2243 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Pcdh20Q8BIZ0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh20Q8BIZ0 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Pcdh20Q8BIZ0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.4■□□□□ 0.86
Pcdh20Q8BIZ0 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC20.4■□□□□ 0.86
Pcdh20Q8BIZ0 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Pcdh20Q8BIZ0 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
Pcdh20Q8BIZ0 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Notumos-201ENSMUST00000151998 2659 ntBASIC20.39■□□□□ 0.85
Pcdh20Q8BIZ0 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 A230052G05Rik-201ENSMUST00000050921 2302 ntBASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 Nsd1-203ENSMUST00000224156 1149 ntBASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
Pcdh20Q8BIZ0 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Pcdh20Q8BIZ0 Lrrc10b-201ENSMUST00000171400 2077 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Gm45444-201ENSMUST00000211394 898 ntBASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
Pcdh20Q8BIZ0 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Pcdh20Q8BIZ0 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcdh20Q8BIZ0 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 1700065D16Rik-202ENSMUST00000188975 506 ntTSL 3 BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Pcdh20Q8BIZ0 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcdh20Q8BIZ0 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcdh20Q8BIZ0 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Gm5812-201ENSMUST00000061073 957 ntBASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Notum-203ENSMUST00000106178 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcdh20Q8BIZ0 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcdh20Q8BIZ0 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh20Q8BIZ0 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh20Q8BIZ0 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh20Q8BIZ0 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh20Q8BIZ0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcdh20Q8BIZ0 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms