Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Clrn3Q8BHH8 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Clrn3Q8BHH8 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn3Q8BHH8 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC19.64■□□□□ 0.73
Clrn3Q8BHH8 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn3Q8BHH8 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn3Q8BHH8 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Clrn3Q8BHH8 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Clrn3Q8BHH8 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn3Q8BHH8 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn3Q8BHH8 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
Clrn3Q8BHH8 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Clrn3Q8BHH8 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
Clrn3Q8BHH8 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Gm15043-201ENSMUST00000118843 1543 ntBASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Zfp346-203ENSMUST00000159278 1253 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
Clrn3Q8BHH8 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Fastk-202ENSMUST00000115041 1399 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Iqck-206ENSMUST00000208658 2891 ntBASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Atp8a1-203ENSMUST00000113651 808 ntTSL 5 BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Gm43566-201ENSMUST00000196851 808 ntBASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Clrn3Q8BHH8 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 C1qtnf5-203ENSMUST00000114818 1337 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Clrn3Q8BHH8 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.58■□□□□ 0.73
Clrn3Q8BHH8 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Clrn3Q8BHH8 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
Clrn3Q8BHH8 Gm26660-201ENSMUST00000181582 2543 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clrn3Q8BHH8 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Clrn3Q8BHH8 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clrn3Q8BHH8 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Clrn3Q8BHH8 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Clrn3Q8BHH8 Gm32051-202ENSMUST00000197905 2385 ntBASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC19.57■□□□□ 0.72
Clrn3Q8BHH8 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Clrn3Q8BHH8 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Gm20684-201ENSMUST00000176744 380 ntTSL 3 BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Clrn3Q8BHH8 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Clrn3Q8BHH8 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms