Protein–RNA interactions for Protein: Q8BGX7

Spidr, DNA repair-scaffolding protein, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpidrQ8BGX7 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC24.88■■□□□ 1.57
SpidrQ8BGX7 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC24.88■■□□□ 1.57
SpidrQ8BGX7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC24.88■■□□□ 1.57
SpidrQ8BGX7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SpidrQ8BGX7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SpidrQ8BGX7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC24.88■■□□□ 1.57
SpidrQ8BGX7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC24.87■■□□□ 1.57
SpidrQ8BGX7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC24.87■■□□□ 1.57
SpidrQ8BGX7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC24.87■■□□□ 1.57
SpidrQ8BGX7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SpidrQ8BGX7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SpidrQ8BGX7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SpidrQ8BGX7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SpidrQ8BGX7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC24.86■■□□□ 1.57
SpidrQ8BGX7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC24.85■■□□□ 1.57
SpidrQ8BGX7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SpidrQ8BGX7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SpidrQ8BGX7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SpidrQ8BGX7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SpidrQ8BGX7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SpidrQ8BGX7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
SpidrQ8BGX7 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC24.83■■□□□ 1.57
SpidrQ8BGX7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SpidrQ8BGX7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SpidrQ8BGX7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC24.83■■□□□ 1.56
SpidrQ8BGX7 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.56
SpidrQ8BGX7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SpidrQ8BGX7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC24.82■■□□□ 1.56
SpidrQ8BGX7 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC24.82■■□□□ 1.56
SpidrQ8BGX7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC24.82■■□□□ 1.56
SpidrQ8BGX7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SpidrQ8BGX7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC24.81■■□□□ 1.56
SpidrQ8BGX7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC24.81■■□□□ 1.56
SpidrQ8BGX7 Gp1bb-201ENSMUST00000051160 645 ntAPPRIS P3 BASIC24.81■■□□□ 1.56
SpidrQ8BGX7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SpidrQ8BGX7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SpidrQ8BGX7 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
SpidrQ8BGX7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
SpidrQ8BGX7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SpidrQ8BGX7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC24.79■■□□□ 1.56
SpidrQ8BGX7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SpidrQ8BGX7 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC24.77■■□□□ 1.56
SpidrQ8BGX7 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC24.76■■□□□ 1.55
SpidrQ8BGX7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SpidrQ8BGX7 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
SpidrQ8BGX7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SpidrQ8BGX7 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SpidrQ8BGX7 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
SpidrQ8BGX7 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SpidrQ8BGX7 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SpidrQ8BGX7 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC24.75■■□□□ 1.55
SpidrQ8BGX7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC24.75■■□□□ 1.55
SpidrQ8BGX7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC24.75■■□□□ 1.55
SpidrQ8BGX7 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC24.74■■□□□ 1.55
SpidrQ8BGX7 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SpidrQ8BGX7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SpidrQ8BGX7 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC24.73■■□□□ 1.55
SpidrQ8BGX7 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC24.73■■□□□ 1.55
SpidrQ8BGX7 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms