Protein–RNA interactions for Protein: Q8BG54

Sptlc3, Serine palmitoyltransferase 3, mousemouse

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc3Q8BG54 Terf2-202ENSMUST00000068421 2667 ntAPPRIS ALT2 TSL 5 BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Gm21956-201ENSMUST00000179946 522 ntBASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC25.41■■□□□ 1.66
Sptlc3Q8BG54 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC25.4■■□□□ 1.66
Sptlc3Q8BG54 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sptlc3Q8BG54 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sptlc3Q8BG54 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC25.39■■□□□ 1.66
Sptlc3Q8BG54 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC25.39■■□□□ 1.66
Sptlc3Q8BG54 Gm9847-201ENSMUST00000052528 599 ntBASIC25.39■■□□□ 1.66
Sptlc3Q8BG54 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC25.38■■□□□ 1.65
Sptlc3Q8BG54 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sptlc3Q8BG54 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sptlc3Q8BG54 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sptlc3Q8BG54 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC25.37■■□□□ 1.65
Sptlc3Q8BG54 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC25.37■■□□□ 1.65
Sptlc3Q8BG54 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.37■■□□□ 1.65
Sptlc3Q8BG54 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC25.36■■□□□ 1.65
Sptlc3Q8BG54 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC25.36■■□□□ 1.65
Sptlc3Q8BG54 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sptlc3Q8BG54 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sptlc3Q8BG54 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sptlc3Q8BG54 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
Sptlc3Q8BG54 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.35■■□□□ 1.65
Sptlc3Q8BG54 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
Sptlc3Q8BG54 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC25.35■■□□□ 1.65
Sptlc3Q8BG54 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC25.35■■□□□ 1.65
Sptlc3Q8BG54 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Gm12922-201ENSMUST00000120626 809 ntBASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Gm13241-201ENSMUST00000094493 780 ntBASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC25.34■■□□□ 1.65
Sptlc3Q8BG54 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC25.33■■□□□ 1.65
Sptlc3Q8BG54 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sptlc3Q8BG54 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sptlc3Q8BG54 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sptlc3Q8BG54 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sptlc3Q8BG54 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sptlc3Q8BG54 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Gm15039-201ENSMUST00000118914 875 ntBASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Gm43034-201ENSMUST00000198678 1364 ntBASIC25.31■■□□□ 1.64
Sptlc3Q8BG54 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sptlc3Q8BG54 Uap1-203ENSMUST00000111351 2287 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sptlc3Q8BG54 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC25.28■■□□□ 1.64
Sptlc3Q8BG54 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sptlc3Q8BG54 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sptlc3Q8BG54 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sptlc3Q8BG54 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC25.27■■□□□ 1.64
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms