Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Trim36Q80WG7 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Fam89b-203ENSMUST00000161368 1160 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Trim36Q80WG7 Gm12504-201ENSMUST00000120860 2231 ntBASIC20.17■□□□□ 0.82
Trim36Q80WG7 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Gm37415-201ENSMUST00000192265 2054 ntBASIC20.16■□□□□ 0.82
Trim36Q80WG7 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Plpp5-207ENSMUST00000139836 1539 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Trim36Q80WG7 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Trim36Q80WG7 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim36Q80WG7 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim36Q80WG7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim36Q80WG7 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Trim36Q80WG7 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
Trim36Q80WG7 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Trim36Q80WG7 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim36Q80WG7 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Trim36Q80WG7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Trim36Q80WG7 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim36Q80WG7 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim36Q80WG7 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim36Q80WG7 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.13■□□□□ 0.81
Trim36Q80WG7 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim36Q80WG7 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Trim36Q80WG7 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.13■□□□□ 0.81
Trim36Q80WG7 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
Trim36Q80WG7 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Gm5812-201ENSMUST00000061073 957 ntBASIC20.12■□□□□ 0.81
Trim36Q80WG7 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Trim36Q80WG7 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Trim36Q80WG7 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC20.11■□□□□ 0.81
Trim36Q80WG7 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
Trim36Q80WG7 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Maf1-204ENSMUST00000160172 1537 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Atf5-201ENSMUST00000047356 1816 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Gm10125-205ENSMUST00000161921 1463 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Spag4-201ENSMUST00000038860 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Trim36Q80WG7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim36Q80WG7 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim36Q80WG7 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.1■□□□□ 0.81
Trim36Q80WG7 Gm43592-201ENSMUST00000196922 1165 ntBASIC20.1■□□□□ 0.81
Trim36Q80WG7 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Trim36Q80WG7 Msc-201ENSMUST00000027062 1741 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Trim36Q80WG7 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim36Q80WG7 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Trim36Q80WG7 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Trim36Q80WG7 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Trim36Q80WG7 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Trim36Q80WG7 Gm42418-201ENSMUST00000182010 1831 ntBASIC20.09■□□□□ 0.81
Trim36Q80WG7 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Trim36Q80WG7 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Trim36Q80WG7 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.08■□□□□ 0.81
Trim36Q80WG7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
Trim36Q80WG7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC20.08■□□□□ 0.8
Trim36Q80WG7 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim36Q80WG7 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC20.08■□□□□ 0.8
Trim36Q80WG7 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Trim36Q80WG7 Hdgfl3-202ENSMUST00000107305 5887 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim36Q80WG7 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim36Q80WG7 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.07■□□□□ 0.8
Trim36Q80WG7 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim36Q80WG7 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Trim36Q80WG7 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Trim36Q80WG7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC20.06■□□□□ 0.8
Trim36Q80WG7 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Trim36Q80WG7 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms