Protein–RNA interactions for Protein: Q7TQK4

Exosc3, Exosome complex component RRP40, mousemouse

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Exosc3Q7TQK4 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 Gm18755-201ENSMUST00000218030 1099 ntBASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Exosc3Q7TQK4 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 Gm37415-201ENSMUST00000192265 2054 ntBASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 Gm15546-201ENSMUST00000122095 826 ntBASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC19.4■□□□□ 0.7
Exosc3Q7TQK4 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Exosc3Q7TQK4 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Exosc3Q7TQK4 Gm15820-201ENSMUST00000201566 728 ntBASIC19.39■□□□□ 0.69
Exosc3Q7TQK4 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Exosc3Q7TQK4 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Exosc3Q7TQK4 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Exosc3Q7TQK4 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Exosc3Q7TQK4 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Exosc3Q7TQK4 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Exosc3Q7TQK4 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Exosc3Q7TQK4 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Exosc3Q7TQK4 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Exosc3Q7TQK4 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Exosc3Q7TQK4 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Exosc3Q7TQK4 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Exosc3Q7TQK4 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.37■□□□□ 0.69
Exosc3Q7TQK4 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
Exosc3Q7TQK4 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.36■□□□□ 0.69
Exosc3Q7TQK4 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Exosc3Q7TQK4 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Exosc3Q7TQK4 Gm10399-202ENSMUST00000202768 748 ntBASIC19.34■□□□□ 0.69
Exosc3Q7TQK4 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Exosc3Q7TQK4 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.33■□□□□ 0.68
Exosc3Q7TQK4 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC19.33■□□□□ 0.68
Exosc3Q7TQK4 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Exosc3Q7TQK4 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Exosc3Q7TQK4 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Exosc3Q7TQK4 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Exosc3Q7TQK4 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC19.32■□□□□ 0.68
Exosc3Q7TQK4 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Exosc3Q7TQK4 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Exosc3Q7TQK4 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Exosc3Q7TQK4 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Exosc3Q7TQK4 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Exosc3Q7TQK4 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Exosc3Q7TQK4 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Exosc3Q7TQK4 Chrna7-201ENSMUST00000032738 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Exosc3Q7TQK4 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Exosc3Q7TQK4 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Exosc3Q7TQK4 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Exosc3Q7TQK4 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Exosc3Q7TQK4 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC19.28■□□□□ 0.68
Exosc3Q7TQK4 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 44.7 ms