Protein–RNA interactions for Protein: Q6Q899

Ddx58, Probable ATP-dependent RNA helicase DDX58, mousemouse

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx58Q6Q899 Gm15039-201ENSMUST00000118914 875 ntBASIC26.24■■□□□ 1.79
Ddx58Q6Q899 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx58Q6Q899 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx58Q6Q899 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx58Q6Q899 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Ddx58Q6Q899 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC26.23■■□□□ 1.79
Ddx58Q6Q899 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC26.22■■□□□ 1.79
Ddx58Q6Q899 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx58Q6Q899 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC26.22■■□□□ 1.79
Ddx58Q6Q899 Vamp4-204ENSMUST00000135241 1461 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Ddx58Q6Q899 Gm43034-201ENSMUST00000198678 1364 ntBASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Gm15202-201ENSMUST00000154188 393 ntTSL 3 BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC26.21■■□□□ 1.79
Ddx58Q6Q899 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Ddx58Q6Q899 Rem1-201ENSMUST00000000369 1663 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx58Q6Q899 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
Ddx58Q6Q899 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
Ddx58Q6Q899 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.2■■□□□ 1.78
Ddx58Q6Q899 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC26.2■■□□□ 1.78
Ddx58Q6Q899 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx58Q6Q899 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx58Q6Q899 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC26.19■■□□□ 1.78
Ddx58Q6Q899 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx58Q6Q899 Gm21956-201ENSMUST00000179946 522 ntBASIC26.19■■□□□ 1.78
Ddx58Q6Q899 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC26.19■■□□□ 1.78
Ddx58Q6Q899 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
Ddx58Q6Q899 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Dctn3-203ENSMUST00000171641 885 ntTSL 3 BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
Ddx58Q6Q899 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
Ddx58Q6Q899 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
Ddx58Q6Q899 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx58Q6Q899 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx58Q6Q899 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.15■■□□□ 1.78
Ddx58Q6Q899 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Ddx58Q6Q899 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx58Q6Q899 Bex1-202ENSMUST00000113118 754 ntAPPRIS P1 TSL 2 BASIC26.14■■□□□ 1.78
Ddx58Q6Q899 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC26.14■■□□□ 1.78
Ddx58Q6Q899 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
Ddx58Q6Q899 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ddx58Q6Q899 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Ddx58Q6Q899 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx58Q6Q899 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Ddx58Q6Q899 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
Ddx58Q6Q899 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
Ddx58Q6Q899 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx58Q6Q899 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx58Q6Q899 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC26.12■■□□□ 1.77
Ddx58Q6Q899 Golgb1-201ENSMUST00000023534 498 ntBASIC26.12■■□□□ 1.77
Ddx58Q6Q899 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Ddx58Q6Q899 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC26.11■■□□□ 1.77
Ddx58Q6Q899 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx58Q6Q899 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx58Q6Q899 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC26.1■■□□□ 1.77
Ddx58Q6Q899 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx58Q6Q899 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
Ddx58Q6Q899 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx58Q6Q899 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx58Q6Q899 AC153962.1-201ENSMUST00000218530 1948 ntBASIC26.09■■□□□ 1.77
Ddx58Q6Q899 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC26.09■■□□□ 1.77
Ddx58Q6Q899 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Ddx58Q6Q899 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC26.09■■□□□ 1.77
Ddx58Q6Q899 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
Ddx58Q6Q899 Rexo2-208ENSMUST00000216470 454 ntTSL 3 BASIC26.08■■□□□ 1.77
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms