Protein–RNA interactions for Protein: Q6PFR5

Tra2a, Transformer-2 protein homolog alpha, mousemouse

Known RBP Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tra2aQ6PFR5 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tra2aQ6PFR5 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Tra2aQ6PFR5 Gm6139-201ENSMUST00000079261 882 ntBASIC20.82■□□□□ 0.92
Tra2aQ6PFR5 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Tra2aQ6PFR5 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tra2aQ6PFR5 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tra2aQ6PFR5 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.81■□□□□ 0.92
Tra2aQ6PFR5 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Tra2aQ6PFR5 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tra2aQ6PFR5 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.8■□□□□ 0.92
Tra2aQ6PFR5 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tra2aQ6PFR5 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tra2aQ6PFR5 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tra2aQ6PFR5 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Tra2aQ6PFR5 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Tra2aQ6PFR5 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tra2aQ6PFR5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.78■□□□□ 0.92
Tra2aQ6PFR5 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Tra2aQ6PFR5 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Gm18284-201ENSMUST00000172604 624 ntBASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Gm43137-201ENSMUST00000198052 594 ntBASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Tra2aQ6PFR5 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Gm10657-201ENSMUST00000193528 1031 ntBASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Gm7143-201ENSMUST00000222811 859 ntBASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Tra2aQ6PFR5 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Gm28050-202ENSMUST00000131029 663 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Tra2aQ6PFR5 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Gm21168-201ENSMUST00000199646 1096 ntBASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.74■□□□□ 0.91
Tra2aQ6PFR5 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Tra2aQ6PFR5 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 Mir7075-201ENSMUST00000184187 82 ntBASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Tra2aQ6PFR5 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Slc25a3-203ENSMUST00000164505 1483 ntAPPRIS P2 TSL 5 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC20.71■□□□□ 0.91
Tra2aQ6PFR5 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Gm5576-201ENSMUST00000075809 1236 ntBASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Tra2aQ6PFR5 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 13.9 ms