Protein–RNA interactions for Protein: Q6PDC0

Rundc3b, RUN domain-containing protein 3B, mousemouse

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rundc3bQ6PDC0 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Capns1-203ENSMUST00000126116 1429 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rundc3bQ6PDC0 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Cyp4f15-201ENSMUST00000008801 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rundc3bQ6PDC0 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.74■□□□□ 0.75
Rundc3bQ6PDC0 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3bQ6PDC0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rundc3bQ6PDC0 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Hfe2-201ENSMUST00000049208 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Sephs1-202ENSMUST00000115019 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Ptov1-201ENSMUST00000046575 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rundc3bQ6PDC0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rundc3bQ6PDC0 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3bQ6PDC0 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3bQ6PDC0 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3bQ6PDC0 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rundc3bQ6PDC0 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Gm4799-201ENSMUST00000095396 657 ntBASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Atrn-201ENSMUST00000028781 8745 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rundc3bQ6PDC0 Rspo1-201ENSMUST00000030687 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 AC122317.2-201ENSMUST00000218708 1248 ntBASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rundc3bQ6PDC0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Iqck-206ENSMUST00000208658 2891 ntBASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rundc3bQ6PDC0 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3bQ6PDC0 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Rundc3bQ6PDC0 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3bQ6PDC0 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3bQ6PDC0 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rundc3bQ6PDC0 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Terc-201ENSMUST00000082862 423 ntBASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Oaz2-201ENSMUST00000046490 1840 ntAPPRIS ALT1 TSL 5 BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rundc3bQ6PDC0 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Slc35f3-201ENSMUST00000108759 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Irx2-201ENSMUST00000074372 2625 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rundc3bQ6PDC0 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
Rundc3bQ6PDC0 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms