Protein–RNA interactions for Protein: Q62388

Atm, Serine-protein kinase ATM, mousemouse

Predictions only

Length 3,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AtmQ62388 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AtmQ62388 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AtmQ62388 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AtmQ62388 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC20.38■□□□□ 0.85
AtmQ62388 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.38■□□□□ 0.85
AtmQ62388 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AtmQ62388 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AtmQ62388 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AtmQ62388 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
AtmQ62388 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
AtmQ62388 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AtmQ62388 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
AtmQ62388 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
AtmQ62388 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
AtmQ62388 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.36■□□□□ 0.85
AtmQ62388 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
AtmQ62388 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
AtmQ62388 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
AtmQ62388 Mpig6b-202ENSMUST00000174190 729 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.35■□□□□ 0.85
AtmQ62388 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.35■□□□□ 0.85
AtmQ62388 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
AtmQ62388 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.35■□□□□ 0.85
AtmQ62388 Bex4-201ENSMUST00000116527 837 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AtmQ62388 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
AtmQ62388 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AtmQ62388 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AtmQ62388 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
AtmQ62388 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.34■□□□□ 0.85
AtmQ62388 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.34■□□□□ 0.85
AtmQ62388 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
AtmQ62388 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
AtmQ62388 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
AtmQ62388 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
AtmQ62388 Ssbp1-205ENSMUST00000121360 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
AtmQ62388 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
AtmQ62388 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
AtmQ62388 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
AtmQ62388 Gm42569-201ENSMUST00000200539 472 ntBASIC20.33■□□□□ 0.84
AtmQ62388 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
AtmQ62388 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
AtmQ62388 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
AtmQ62388 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AtmQ62388 Akr7a5-201ENSMUST00000073787 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
AtmQ62388 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.31■□□□□ 0.84
AtmQ62388 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
AtmQ62388 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.3■□□□□ 0.84
AtmQ62388 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.3■□□□□ 0.84
AtmQ62388 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AtmQ62388 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AtmQ62388 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AtmQ62388 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
AtmQ62388 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
AtmQ62388 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AtmQ62388 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
AtmQ62388 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.29■□□□□ 0.84
AtmQ62388 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.29■□□□□ 0.84
AtmQ62388 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
AtmQ62388 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
AtmQ62388 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
AtmQ62388 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
AtmQ62388 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
AtmQ62388 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AtmQ62388 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
AtmQ62388 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
AtmQ62388 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AtmQ62388 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
AtmQ62388 Gm10493-201ENSMUST00000097270 612 ntBASIC20.28■□□□□ 0.84
AtmQ62388 Gm42642-201ENSMUST00000200683 355 ntBASIC20.28■□□□□ 0.84
AtmQ62388 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
AtmQ62388 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AtmQ62388 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
AtmQ62388 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AtmQ62388 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
AtmQ62388 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
AtmQ62388 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.27■□□□□ 0.83
AtmQ62388 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AtmQ62388 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
AtmQ62388 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC20.26■□□□□ 0.83
AtmQ62388 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.26■□□□□ 0.83
AtmQ62388 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
AtmQ62388 Bola1-202ENSMUST00000107099 995 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
AtmQ62388 Bola1-201ENSMUST00000016087 729 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.25■□□□□ 0.83
AtmQ62388 Bola1-203ENSMUST00000177442 692 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
AtmQ62388 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
AtmQ62388 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC20.25■□□□□ 0.83
AtmQ62388 Gm43173-201ENSMUST00000202246 593 ntBASIC20.25■□□□□ 0.83
AtmQ62388 Trnau1ap-201ENSMUST00000030730 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
AtmQ62388 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
AtmQ62388 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms