Protein–RNA interactions for Protein: Q62232

Six2, Homeobox protein SIX2, mousemouse

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six2Q62232 Gm13238-201ENSMUST00000117655 780 ntBASIC22.58■■□□□ 1.21
Six2Q62232 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Six2Q62232 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC22.58■■□□□ 1.21
Six2Q62232 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC22.58■■□□□ 1.21
Six2Q62232 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Six2Q62232 Kdm3b-204ENSMUST00000224715 2032 ntBASIC22.58■■□□□ 1.2
Six2Q62232 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Six2Q62232 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 AC116713.1-201ENSMUST00000215074 430 ntBASIC22.57■■□□□ 1.2
Six2Q62232 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 Fn1-208ENSMUST00000186940 1350 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Six2Q62232 Gm8093-201ENSMUST00000128935 1892 ntBASIC22.56■■□□□ 1.2
Six2Q62232 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Six2Q62232 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC22.55■■□□□ 1.2
Six2Q62232 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.55■■□□□ 1.2
Six2Q62232 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC22.55■■□□□ 1.2
Six2Q62232 Gm45444-201ENSMUST00000211394 898 ntBASIC22.55■■□□□ 1.2
Six2Q62232 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC22.55■■□□□ 1.2
Six2Q62232 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC22.55■■□□□ 1.2
Six2Q62232 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Six2Q62232 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Six2Q62232 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.54■■□□□ 1.2
Six2Q62232 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Six2Q62232 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Six2Q62232 Papola-211ENSMUST00000166735 1033 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Six2Q62232 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Six2Q62232 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Six2Q62232 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Six2Q62232 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.53■■□□□ 1.2
Six2Q62232 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC22.53■■□□□ 1.2
Six2Q62232 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Six2Q62232 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC22.53■■□□□ 1.2
Six2Q62232 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC22.53■■□□□ 1.2
Six2Q62232 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.53■■□□□ 1.2
Six2Q62232 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six2Q62232 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC22.52■■□□□ 1.2
Six2Q62232 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six2Q62232 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC22.52■■□□□ 1.2
Six2Q62232 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC22.52■■□□□ 1.2
Six2Q62232 Vegfb-201ENSMUST00000025914 1281 ntAPPRIS P3 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six2Q62232 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six2Q62232 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Six2Q62232 Hsf1-201ENSMUST00000072838 2018 ntTSL 1 (best) BASIC22.52■■□□□ 1.19
Six2Q62232 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six2Q62232 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six2Q62232 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six2Q62232 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six2Q62232 Mettl25-201ENSMUST00000046638 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Six2Q62232 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC22.51■■□□□ 1.19
Six2Q62232 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Six2Q62232 Lhx2-201ENSMUST00000000253 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Six2Q62232 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
Six2Q62232 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC22.5■■□□□ 1.19
Six2Q62232 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Six2Q62232 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Six2Q62232 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Six2Q62232 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC22.49■■□□□ 1.19
Six2Q62232 Has1-201ENSMUST00000003762 2090 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Six2Q62232 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Six2Q62232 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Six2Q62232 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Six2Q62232 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Six2Q62232 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC22.48■■□□□ 1.19
Six2Q62232 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.48■■□□□ 1.19
Six2Q62232 Gm5921-201ENSMUST00000075898 882 ntBASIC22.48■■□□□ 1.19
Six2Q62232 Cgrrf1-201ENSMUST00000068532 1324 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Six2Q62232 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Six2Q62232 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Six2Q62232 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Six2Q62232 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC22.47■■□□□ 1.19
Six2Q62232 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.47■■□□□ 1.19
Six2Q62232 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Six2Q62232 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC22.47■■□□□ 1.19
Six2Q62232 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC22.47■■□□□ 1.19
Six2Q62232 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Six2Q62232 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC22.47■■□□□ 1.19
Six2Q62232 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Six2Q62232 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
Six2Q62232 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Six2Q62232 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC22.46■■□□□ 1.19
Six2Q62232 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Six2Q62232 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC22.46■■□□□ 1.19
Six2Q62232 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Six2Q62232 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC22.46■■□□□ 1.19
Six2Q62232 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC22.45■■□□□ 1.18
Six2Q62232 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Six2Q62232 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC22.45■■□□□ 1.18
Six2Q62232 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
Six2Q62232 Gm43566-201ENSMUST00000196851 808 ntBASIC22.45■■□□□ 1.18
Six2Q62232 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Retrieved 100 of 76,532 protein–RNA pairs in 73.6 ms