Protein–RNA interactions for Protein: Q62231

Six1, Homeobox protein SIX1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six1Q62231 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six1Q62231 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six1Q62231 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six1Q62231 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six1Q62231 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC21.7■■□□□ 1.06
Six1Q62231 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six1Q62231 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC21.7■■□□□ 1.06
Six1Q62231 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six1Q62231 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six1Q62231 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six1Q62231 A030014E15Rik-201ENSMUST00000223400 796 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Six1Q62231 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC21.69■■□□□ 1.06
Six1Q62231 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Six1Q62231 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Six1Q62231 Tada1-201ENSMUST00000027846 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six1Q62231 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC21.68■■□□□ 1.06
Six1Q62231 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six1Q62231 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.68■■□□□ 1.06
Six1Q62231 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six1Q62231 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Six1Q62231 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Six1Q62231 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC21.68■■□□□ 1.06
Six1Q62231 Gm44949-201ENSMUST00000206423 1450 ntBASIC21.68■■□□□ 1.06
Six1Q62231 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six1Q62231 4430402I18Rik-201ENSMUST00000025872 2152 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six1Q62231 3110053B16Rik-202ENSMUST00000140360 2004 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Six1Q62231 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six1Q62231 Dedd2-202ENSMUST00000205271 1942 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Six1Q62231 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Six1Q62231 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six1Q62231 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six1Q62231 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six1Q62231 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Six1Q62231 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six1Q62231 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC21.66■■□□□ 1.06
Six1Q62231 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Six1Q62231 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.66■■□□□ 1.06
Six1Q62231 Spata5l1-202ENSMUST00000152813 1526 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
Six1Q62231 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 Gm10125-201ENSMUST00000074702 2286 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Six1Q62231 Nkpd1-203ENSMUST00000214205 2309 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.06
Six1Q62231 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC21.64■■□□□ 1.06
Six1Q62231 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Six1Q62231 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six1Q62231 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC21.64■■□□□ 1.05
Six1Q62231 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six1Q62231 Stbd1-201ENSMUST00000050952 1985 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six1Q62231 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six1Q62231 Snhg20-203ENSMUST00000182811 2153 ntBASIC21.64■■□□□ 1.05
Six1Q62231 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six1Q62231 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Six1Q62231 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Six1Q62231 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six1Q62231 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six1Q62231 Morf4l1-202ENSMUST00000169860 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six1Q62231 Fgfbp3-201ENSMUST00000057337 1772 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Six1Q62231 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Six1Q62231 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Six1Q62231 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.62■■□□□ 1.05
Six1Q62231 Gm12366-201ENSMUST00000121722 873 ntBASIC21.62■■□□□ 1.05
Six1Q62231 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.62■■□□□ 1.05
Six1Q62231 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.62■■□□□ 1.05
Six1Q62231 Gm5786-201ENSMUST00000085368 882 ntBASIC21.62■■□□□ 1.05
Six1Q62231 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six1Q62231 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six1Q62231 Cavin3-201ENSMUST00000047040 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six1Q62231 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
Six1Q62231 Cbx3-201ENSMUST00000031862 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six1Q62231 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
Six1Q62231 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC21.61■■□□□ 1.05
Six1Q62231 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC21.61■■□□□ 1.05
Six1Q62231 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Six1Q62231 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC21.61■■□□□ 1.05
Six1Q62231 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.61■■□□□ 1.05
Six1Q62231 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six1Q62231 Ubl7-208ENSMUST00000216841 1426 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
Six1Q62231 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Six1Q62231 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Six1Q62231 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six1Q62231 Akt1-201ENSMUST00000001780 2690 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Six1Q62231 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six1Q62231 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six1Q62231 Gm21988-202ENSMUST00000176268 1621 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
Six1Q62231 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.6■■□□□ 1.05
Six1Q62231 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Six1Q62231 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.6■■□□□ 1.05
Six1Q62231 B3galnt1-201ENSMUST00000061826 2028 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Six1Q62231 Sephs2-201ENSMUST00000082428 2177 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Six1Q62231 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Six1Q62231 Notumos-201ENSMUST00000151998 2659 ntBASIC21.59■■□□□ 1.05
Six1Q62231 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
Six1Q62231 Gm9817-201ENSMUST00000054395 2531 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
Six1Q62231 Trak1-208ENSMUST00000210636 2197 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Six1Q62231 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
Six1Q62231 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms