Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.5■□□□□ 0.39
SspnQ62147 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SspnQ62147 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SspnQ62147 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SspnQ62147 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SspnQ62147 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SspnQ62147 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SspnQ62147 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SspnQ62147 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC17.49■□□□□ 0.39
SspnQ62147 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SspnQ62147 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SspnQ62147 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.49■□□□□ 0.39
SspnQ62147 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SspnQ62147 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SspnQ62147 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SspnQ62147 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.47■□□□□ 0.39
SspnQ62147 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC17.47■□□□□ 0.39
SspnQ62147 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
SspnQ62147 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
SspnQ62147 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SspnQ62147 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC17.47■□□□□ 0.39
SspnQ62147 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC17.47■□□□□ 0.39
SspnQ62147 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
SspnQ62147 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SspnQ62147 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SspnQ62147 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SspnQ62147 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SspnQ62147 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC17.46■□□□□ 0.39
SspnQ62147 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC17.46■□□□□ 0.39
SspnQ62147 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SspnQ62147 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
SspnQ62147 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SspnQ62147 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
SspnQ62147 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
SspnQ62147 Gm37415-201ENSMUST00000192265 2054 ntBASIC17.45■□□□□ 0.38
SspnQ62147 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.45■□□□□ 0.38
SspnQ62147 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Slc10a3-201ENSMUST00000037967 2023 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SspnQ62147 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.44■□□□□ 0.38
SspnQ62147 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Pex7-203ENSMUST00000166511 1047 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
SspnQ62147 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SspnQ62147 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SspnQ62147 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC17.43■□□□□ 0.38
SspnQ62147 Gm10420-201ENSMUST00000121713 882 ntBASIC17.43■□□□□ 0.38
SspnQ62147 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
SspnQ62147 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SspnQ62147 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SspnQ62147 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SspnQ62147 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
SspnQ62147 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC17.42■□□□□ 0.38
SspnQ62147 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC17.42■□□□□ 0.38
SspnQ62147 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 Gls-202ENSMUST00000114510 5596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SspnQ62147 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SspnQ62147 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SspnQ62147 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SspnQ62147 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SspnQ62147 Gm43592-201ENSMUST00000196922 1165 ntBASIC17.41■□□□□ 0.38
SspnQ62147 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC17.41■□□□□ 0.38
SspnQ62147 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SspnQ62147 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
SspnQ62147 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
SspnQ62147 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SspnQ62147 Vcpkmt-201ENSMUST00000058639 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SspnQ62147 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SspnQ62147 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SspnQ62147 Psmd7-201ENSMUST00000044106 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SspnQ62147 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SspnQ62147 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.38
SspnQ62147 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
SspnQ62147 Mbd3-201ENSMUST00000092295 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SspnQ62147 Gxylt1-201ENSMUST00000049484 6611 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
SspnQ62147 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 51.5 ms