Protein–RNA interactions for Protein: Q61412

Vsx2, Visual system homeobox 2, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx2Q61412 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Gm32051-202ENSMUST00000197905 2385 ntBASIC20.41■□□□□ 0.86
Vsx2Q61412 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.41■□□□□ 0.86
Vsx2Q61412 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Nkx2-5-201ENSMUST00000015723 1525 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
Vsx2Q61412 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.41■□□□□ 0.86
Vsx2Q61412 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Vsx2Q61412 Gm15820-201ENSMUST00000201566 728 ntBASIC20.4■□□□□ 0.86
Vsx2Q61412 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Vsx2Q61412 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Vsx2Q61412 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vsx2Q61412 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vsx2Q61412 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vsx2Q61412 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vsx2Q61412 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Vsx2Q61412 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx2Q61412 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Vsx2Q61412 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx2Q61412 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Vsx2Q61412 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
Vsx2Q61412 Suz12-206ENSMUST00000163272 4303 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
Vsx2Q61412 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.39■□□□□ 0.85
Vsx2Q61412 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx2Q61412 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx2Q61412 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx2Q61412 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
Vsx2Q61412 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.38■□□□□ 0.85
Vsx2Q61412 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Vsx2Q61412 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx2Q61412 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx2Q61412 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC20.38■□□□□ 0.85
Vsx2Q61412 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Vsx2Q61412 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vsx2Q61412 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vsx2Q61412 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vsx2Q61412 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
Vsx2Q61412 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC20.37■□□□□ 0.85
Vsx2Q61412 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Vsx2Q61412 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx2Q61412 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx2Q61412 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx2Q61412 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx2Q61412 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC20.36■□□□□ 0.85
Vsx2Q61412 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx2Q61412 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
Vsx2Q61412 Gm28536-201ENSMUST00000190971 1317 ntBASIC20.35■□□□□ 0.85
Vsx2Q61412 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx2Q61412 Trappc6b-207ENSMUST00000218686 785 ntTSL 3 BASIC20.35■□□□□ 0.85
Vsx2Q61412 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Vsx2Q61412 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx2Q61412 Ptpn12-201ENSMUST00000030556 3280 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx2Q61412 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Vsx2Q61412 AC153962.1-201ENSMUST00000218530 1948 ntBASIC20.35■□□□□ 0.85
Vsx2Q61412 Dok6-201ENSMUST00000097495 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Vsx2Q61412 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx2Q61412 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vsx2Q61412 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx2Q61412 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx2Q61412 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx2Q61412 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx2Q61412 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Vsx2Q61412 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Vsx2Q61412 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Vsx2Q61412 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC20.33■□□□□ 0.85
Vsx2Q61412 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC20.33■□□□□ 0.84
Vsx2Q61412 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Vsx2Q61412 Tmem150a-201ENSMUST00000069695 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC20.32■□□□□ 0.84
Vsx2Q61412 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Vsx2Q61412 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Vsx2Q61412 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Gm10232-201ENSMUST00000089221 720 ntBASIC20.31■□□□□ 0.84
Vsx2Q61412 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.31■□□□□ 0.84
Vsx2Q61412 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Vsx2Q61412 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Vsx2Q61412 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx2Q61412 B4galt1-202ENSMUST00000108096 1413 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx2Q61412 Tcerg1l-201ENSMUST00000160436 2565 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
Vsx2Q61412 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Vsx2Q61412 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC20.3■□□□□ 0.84
Vsx2Q61412 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms