Protein–RNA interactions for Protein: Q5R1I9

Trav2, T cell receptor alpha variable 2 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav2Q5R1I9 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC16.75■□□□□ 0.27
Trav2Q5R1I9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC16.75■□□□□ 0.27
Trav2Q5R1I9 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.75■□□□□ 0.27
Trav2Q5R1I9 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trav2Q5R1I9 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trav2Q5R1I9 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC16.74■□□□□ 0.27
Trav2Q5R1I9 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Gm22238-201ENSMUST00000175222 88 ntBASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trav2Q5R1I9 Gm10620-201ENSMUST00000098379 1332 ntBASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Trav2Q5R1I9 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav2Q5R1I9 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav2Q5R1I9 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Trav2Q5R1I9 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC16.71■□□□□ 0.27
Trav2Q5R1I9 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Trav2Q5R1I9 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Trav2Q5R1I9 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC16.69■□□□□ 0.26
Trav2Q5R1I9 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trav2Q5R1I9 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Sel1l3-201ENSMUST00000031090 4512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trav2Q5R1I9 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
Trav2Q5R1I9 Gm9780-202ENSMUST00000184915 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav2Q5R1I9 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
Trav2Q5R1I9 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trav2Q5R1I9 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC16.66■□□□□ 0.26
Trav2Q5R1I9 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trav2Q5R1I9 AC158990.1-201ENSMUST00000221450 2016 ntBASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trav2Q5R1I9 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 57.8 ms