Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 Gm43006-201ENSMUST00000197702 1602 ntBASIC20.79■□□□□ 0.92
Scn2bQ56A07 Slc27a3-201ENSMUST00000029541 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn2bQ56A07 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Scn2bQ56A07 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Scn2bQ56A07 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.79■□□□□ 0.92
Scn2bQ56A07 Pmpca-202ENSMUST00000114093 1638 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn2bQ56A07 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC20.78■□□□□ 0.92
Scn2bQ56A07 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Scn2bQ56A07 Ccdc61-201ENSMUST00000098780 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn2bQ56A07 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Scn2bQ56A07 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
Scn2bQ56A07 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn2bQ56A07 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn2bQ56A07 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn2bQ56A07 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn2bQ56A07 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Scn2bQ56A07 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
Scn2bQ56A07 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Ell3-201ENSMUST00000028679 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Kdm3b-204ENSMUST00000224715 2032 ntBASIC20.76■□□□□ 0.91
Scn2bQ56A07 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Krt8-201ENSMUST00000023952 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Scn2bQ56A07 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Ypel1-201ENSMUST00000035682 3322 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Scn2bQ56A07 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn2bQ56A07 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn2bQ56A07 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn2bQ56A07 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.74■□□□□ 0.91
Scn2bQ56A07 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Scn2bQ56A07 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC20.74■□□□□ 0.91
Scn2bQ56A07 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Scn2bQ56A07 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn2bQ56A07 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn2bQ56A07 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.73■□□□□ 0.91
Scn2bQ56A07 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Scn2bQ56A07 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.73■□□□□ 0.91
Scn2bQ56A07 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC20.73■□□□□ 0.91
Scn2bQ56A07 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Slc35a2-201ENSMUST00000096514 1757 ntTSL 5 BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn2bQ56A07 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Hsf1-207ENSMUST00000228371 2102 ntBASIC20.72■□□□□ 0.91
Scn2bQ56A07 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.72■□□□□ 0.91
Scn2bQ56A07 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Scn2bQ56A07 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Sh2d4b-202ENSMUST00000096000 1597 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Scn2bQ56A07 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Scn2bQ56A07 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
Scn2bQ56A07 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC20.68■□□□□ 0.9
Scn2bQ56A07 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.68■□□□□ 0.9
Scn2bQ56A07 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Exosc8-201ENSMUST00000029316 1300 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Scn2bQ56A07 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Scn2bQ56A07 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms