Protein–RNA interactions for Protein: Q3UPH7

Arhgef40, Rho guanine nucleotide exchange factor 40, mousemouse

Predictions only

Length 1,517 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Arhgef40Q3UPH7 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC31.7■■■□□ 2.67
Arhgef40Q3UPH7 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC31.7■■■□□ 2.67
Arhgef40Q3UPH7 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC31.7■■■□□ 2.67
Arhgef40Q3UPH7 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC31.7■■■□□ 2.66
Arhgef40Q3UPH7 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC31.69■■■□□ 2.66
Arhgef40Q3UPH7 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC31.69■■■□□ 2.66
Arhgef40Q3UPH7 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Arhgef40Q3UPH7 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
Arhgef40Q3UPH7 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Arhgef40Q3UPH7 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Arhgef40Q3UPH7 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC31.68■■■□□ 2.66
Arhgef40Q3UPH7 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
Arhgef40Q3UPH7 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC31.68■■■□□ 2.66
Arhgef40Q3UPH7 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Arhgef40Q3UPH7 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC31.67■■■□□ 2.66
Arhgef40Q3UPH7 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Arhgef40Q3UPH7 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
Arhgef40Q3UPH7 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Arhgef40Q3UPH7 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Arhgef40Q3UPH7 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC31.66■■■□□ 2.66
Arhgef40Q3UPH7 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Arhgef40Q3UPH7 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
Arhgef40Q3UPH7 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC31.65■■■□□ 2.66
Arhgef40Q3UPH7 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Arhgef40Q3UPH7 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC31.65■■■□□ 2.66
Arhgef40Q3UPH7 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC31.65■■■□□ 2.66
Arhgef40Q3UPH7 Gm21964-202ENSMUST00000213641 1649 ntAPPRIS ALT2 TSL 5 BASIC31.65■■■□□ 2.66
Arhgef40Q3UPH7 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.65■■■□□ 2.66
Arhgef40Q3UPH7 Mrpl38-201ENSMUST00000106439 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Arhgef40Q3UPH7 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC31.64■■■□□ 2.66
Arhgef40Q3UPH7 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC31.64■■■□□ 2.66
Arhgef40Q3UPH7 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC31.64■■■□□ 2.66
Arhgef40Q3UPH7 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC31.63■■■□□ 2.65
Arhgef40Q3UPH7 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC31.63■■■□□ 2.65
Arhgef40Q3UPH7 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC31.63■■■□□ 2.65
Arhgef40Q3UPH7 Adora2b-201ENSMUST00000018644 1845 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
Arhgef40Q3UPH7 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Gm9207-201ENSMUST00000198773 1115 ntBASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Gm2011-201ENSMUST00000203124 1263 ntBASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
Arhgef40Q3UPH7 Gm29257-201ENSMUST00000186115 639 ntBASIC31.6■■■□□ 2.65
Arhgef40Q3UPH7 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Arhgef40Q3UPH7 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
Arhgef40Q3UPH7 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC31.6■■■□□ 2.65
Arhgef40Q3UPH7 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC31.59■■■□□ 2.65
Arhgef40Q3UPH7 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Arhgef40Q3UPH7 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC31.59■■■□□ 2.65
Arhgef40Q3UPH7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Arhgef40Q3UPH7 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
Arhgef40Q3UPH7 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
Arhgef40Q3UPH7 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Arhgef40Q3UPH7 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC31.58■■■□□ 2.65
Arhgef40Q3UPH7 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC31.58■■■□□ 2.65
Arhgef40Q3UPH7 Gm9870-201ENSMUST00000063874 645 ntBASIC31.58■■■□□ 2.65
Arhgef40Q3UPH7 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Arhgef40Q3UPH7 Hes7-201ENSMUST00000024543 1809 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
Arhgef40Q3UPH7 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
Arhgef40Q3UPH7 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
Arhgef40Q3UPH7 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC31.57■■■□□ 2.64
Arhgef40Q3UPH7 AC115037.1-201ENSMUST00000223391 2173 ntBASIC31.56■■■□□ 2.64
Arhgef40Q3UPH7 Kdm3b-204ENSMUST00000224715 2032 ntBASIC31.56■■■□□ 2.64
Arhgef40Q3UPH7 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC31.56■■■□□ 2.64
Arhgef40Q3UPH7 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Arhgef40Q3UPH7 Krt8-ps-201ENSMUST00000208495 945 ntBASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 Gm6139-201ENSMUST00000079261 882 ntBASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC31.54■■■□□ 2.64
Arhgef40Q3UPH7 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
Arhgef40Q3UPH7 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC31.52■■■□□ 2.64
Arhgef40Q3UPH7 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms