Protein–RNA interactions for Protein: P97929

Brca2, Breast cancer type 2 susceptibility protein homolog, mousemouse

Predictions only

Length 3,329 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brca2P97929 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Brca2P97929 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.78■□□□□ 0.92
Brca2P97929 Bean1-205ENSMUST00000212979 2131 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Brca2P97929 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Brca2P97929 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca2P97929 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC20.76■□□□□ 0.91
Brca2P97929 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Brca2P97929 Wdr70-203ENSMUST00000227371 1130 ntBASIC20.76■□□□□ 0.91
Brca2P97929 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.76■□□□□ 0.91
Brca2P97929 Gm45890-202ENSMUST00000212188 1052 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Brca2P97929 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca2P97929 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Brca2P97929 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca2P97929 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.75■□□□□ 0.91
Brca2P97929 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca2P97929 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Brca2P97929 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
Brca2P97929 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Brca2P97929 Gm43137-201ENSMUST00000198052 594 ntBASIC20.74■□□□□ 0.91
Brca2P97929 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca2P97929 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca2P97929 Capn10-202ENSMUST00000117814 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Brca2P97929 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC20.73■□□□□ 0.91
Brca2P97929 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Brca2P97929 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Brca2P97929 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC20.73■□□□□ 0.91
Brca2P97929 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Brca2P97929 Mir7075-201ENSMUST00000184187 82 ntBASIC20.73■□□□□ 0.91
Brca2P97929 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC20.72■□□□□ 0.91
Brca2P97929 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Brca2P97929 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Brca2P97929 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Brca2P97929 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.72■□□□□ 0.91
Brca2P97929 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Brca2P97929 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Brca2P97929 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Brca2P97929 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC20.71■□□□□ 0.91
Brca2P97929 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Brca2P97929 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brca2P97929 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Brca2P97929 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brca2P97929 Hoxa9-202ENSMUST00000114425 851 ntTSL 2 BASIC20.71■□□□□ 0.91
Brca2P97929 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
Brca2P97929 Cys1-208ENSMUST00000189849 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Brca2P97929 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Brca2P97929 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brca2P97929 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Brca2P97929 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
Brca2P97929 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Brca2P97929 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
Brca2P97929 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca2P97929 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca2P97929 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Brca2P97929 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC20.69■□□□□ 0.9
Brca2P97929 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Brca2P97929 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brca2P97929 Fcrlb-201ENSMUST00000094337 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brca2P97929 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Brca2P97929 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.68■□□□□ 0.9
Brca2P97929 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.68■□□□□ 0.9
Brca2P97929 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
Brca2P97929 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC20.67■□□□□ 0.9
Brca2P97929 Hsd11b2-201ENSMUST00000034363 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca2P97929 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca2P97929 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Brca2P97929 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca2P97929 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca2P97929 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca2P97929 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca2P97929 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Brca2P97929 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC20.65■□□□□ 0.9
Brca2P97929 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
Brca2P97929 Wnt16-203ENSMUST00000148639 1168 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC20.65■□□□□ 0.9
Brca2P97929 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.65■□□□□ 0.9
Brca2P97929 Gm20163-202ENSMUST00000212288 989 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Brca2P97929 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.64■□□□□ 0.89
Brca2P97929 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC20.64■□□□□ 0.89
Brca2P97929 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Brca2P97929 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.64■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms