Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Npas1P97459 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.49■□□□□ 0.39
Npas1P97459 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Npas1P97459 N4bp1-201ENSMUST00000034074 6469 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Npas1P97459 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC17.48■□□□□ 0.39
Npas1P97459 Terc-201ENSMUST00000082862 423 ntBASIC17.48■□□□□ 0.39
Npas1P97459 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas1P97459 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Npas1P97459 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas1P97459 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas1P97459 Gfra4-203ENSMUST00000110234 600 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas1P97459 Gfra4-204ENSMUST00000110235 573 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas1P97459 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC17.47■□□□□ 0.39
Npas1P97459 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.47■□□□□ 0.39
Npas1P97459 Gm26776-201ENSMUST00000180479 1872 ntTSL 5 BASIC17.47■□□□□ 0.39
Npas1P97459 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Npas1P97459 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Npas1P97459 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Npas1P97459 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas1P97459 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas1P97459 Abhd8-201ENSMUST00000008094 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas1P97459 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas1P97459 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC17.46■□□□□ 0.39
Npas1P97459 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Npas1P97459 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Npas1P97459 AC117245.4-201ENSMUST00000217388 1646 ntBASIC17.46■□□□□ 0.39
Npas1P97459 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Npas1P97459 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Npas1P97459 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Npas1P97459 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Npas1P97459 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Npas1P97459 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 Foxb2-201ENSMUST00000072915 1515 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Npas1P97459 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.44■□□□□ 0.38
Npas1P97459 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC17.44■□□□□ 0.38
Npas1P97459 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Npas1P97459 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Gpr160-204ENSMUST00000108261 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Nrxn2-205ENSMUST00000113462 6667 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Npas1P97459 Cdk8-201ENSMUST00000031640 2973 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Npas1P97459 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npas1P97459 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Npas1P97459 Cmas-201ENSMUST00000032419 1760 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Npas1P97459 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Npas1P97459 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC17.41■□□□□ 0.38
Npas1P97459 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC17.41■□□□□ 0.38
Npas1P97459 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.41■□□□□ 0.38
Npas1P97459 Lrrc38-201ENSMUST00000052458 2324 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Npas1P97459 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Npas1P97459 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
Npas1P97459 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Npas1P97459 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
Npas1P97459 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Npas1P97459 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Npas1P97459 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Npas1P97459 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Npas1P97459 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC17.4■□□□□ 0.38
Npas1P97459 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms