Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Cnot6-203ENSMUST00000145353 5736 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
H3f3aP84244 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3f3aP84244 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
H3f3aP84244 Gm5522-201ENSMUST00000189483 1242 ntBASIC18.78■□□□□ 0.6
H3f3aP84244 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
H3f3aP84244 Gm37415-201ENSMUST00000192265 2054 ntBASIC18.78■□□□□ 0.6
H3f3aP84244 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3f3aP84244 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3f3aP84244 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
H3f3aP84244 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
H3f3aP84244 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H3f3aP84244 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H3f3aP84244 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H3f3aP84244 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
H3f3aP84244 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
H3f3aP84244 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.77■□□□□ 0.6
H3f3aP84244 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.77■□□□□ 0.6
H3f3aP84244 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
H3f3aP84244 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H3f3aP84244 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
H3f3aP84244 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC18.76■□□□□ 0.59
H3f3aP84244 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Cacybp-201ENSMUST00000014370 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
H3f3aP84244 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H3f3aP84244 Slc17a7-201ENSMUST00000085374 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H3f3aP84244 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
H3f3aP84244 Gm18755-201ENSMUST00000218030 1099 ntBASIC18.75■□□□□ 0.59
H3f3aP84244 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.75■□□□□ 0.59
H3f3aP84244 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
H3f3aP84244 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H3f3aP84244 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
H3f3aP84244 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Ube2b-201ENSMUST00000020657 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
H3f3aP84244 Gm15546-201ENSMUST00000122095 826 ntBASIC18.74■□□□□ 0.59
H3f3aP84244 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC18.74■□□□□ 0.59
H3f3aP84244 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC18.74■□□□□ 0.59
H3f3aP84244 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
H3f3aP84244 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
H3f3aP84244 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
H3f3aP84244 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
H3f3aP84244 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC18.72■□□□□ 0.59
H3f3aP84244 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC18.72■□□□□ 0.59
H3f3aP84244 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
H3f3aP84244 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
H3f3aP84244 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.71■□□□□ 0.59
H3f3aP84244 Ergic1-206ENSMUST00000167662 2754 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3f3aP84244 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3f3aP84244 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
H3f3aP84244 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
H3f3aP84244 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
H3f3aP84244 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
H3f3aP84244 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
H3f3aP84244 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
H3f3aP84244 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC18.69■□□□□ 0.58
H3f3aP84244 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3f3aP84244 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3f3aP84244 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC18.68■□□□□ 0.58
H3f3aP84244 Gm15820-201ENSMUST00000201566 728 ntBASIC18.68■□□□□ 0.58
H3f3aP84244 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC18.68■□□□□ 0.58
H3f3aP84244 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3f3aP84244 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
H3f3aP84244 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3f3aP84244 Gm26775-201ENSMUST00000180684 2197 ntTSL 5 BASIC18.68■□□□□ 0.58
H3f3aP84244 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3f3aP84244 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
H3f3aP84244 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.67■□□□□ 0.58
H3f3aP84244 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3f3aP84244 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3f3aP84244 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
H3f3aP84244 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3f3aP84244 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC18.67■□□□□ 0.58
H3f3aP84244 Gm42501-201ENSMUST00000200220 1026 ntBASIC18.67■□□□□ 0.58
H3f3aP84244 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3f3aP84244 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
H3f3aP84244 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
H3f3aP84244 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
H3f3aP84244 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
H3f3aP84244 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
H3f3aP84244 Gm10399-202ENSMUST00000202768 748 ntBASIC18.66■□□□□ 0.58
H3f3aP84244 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.66■□□□□ 0.58
H3f3aP84244 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms