Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
SgcbP82349 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
SgcbP82349 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
SgcbP82349 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Rps24-207ENSMUST00000224568 714 ntBASIC18.74■□□□□ 0.59
SgcbP82349 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC18.74■□□□□ 0.59
SgcbP82349 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
SgcbP82349 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
SgcbP82349 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SgcbP82349 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SgcbP82349 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SgcbP82349 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SgcbP82349 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SgcbP82349 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC18.72■□□□□ 0.59
SgcbP82349 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SgcbP82349 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SgcbP82349 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC18.71■□□□□ 0.59
SgcbP82349 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
SgcbP82349 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SgcbP82349 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Etf1-202ENSMUST00000180351 108 ntBASIC18.71■□□□□ 0.59
SgcbP82349 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC18.71■□□□□ 0.59
SgcbP82349 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SgcbP82349 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SgcbP82349 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SgcbP82349 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC18.71■□□□□ 0.58
SgcbP82349 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SgcbP82349 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC18.7■□□□□ 0.58
SgcbP82349 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SgcbP82349 Gm10399-202ENSMUST00000202768 748 ntBASIC18.7■□□□□ 0.58
SgcbP82349 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC18.7■□□□□ 0.58
SgcbP82349 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC18.69■□□□□ 0.58
SgcbP82349 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC18.69■□□□□ 0.58
SgcbP82349 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC18.69■□□□□ 0.58
SgcbP82349 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC18.69■□□□□ 0.58
SgcbP82349 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.69■□□□□ 0.58
SgcbP82349 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SgcbP82349 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC18.69■□□□□ 0.58
SgcbP82349 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
SgcbP82349 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SgcbP82349 Gm9959-201ENSMUST00000068277 390 ntBASIC18.68■□□□□ 0.58
SgcbP82349 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SgcbP82349 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SgcbP82349 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
SgcbP82349 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
SgcbP82349 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SgcbP82349 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Sdccag3-204ENSMUST00000114102 2193 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC18.67■□□□□ 0.58
SgcbP82349 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC18.67■□□□□ 0.58
SgcbP82349 Gm5131-201ENSMUST00000212776 1238 ntBASIC18.67■□□□□ 0.58
SgcbP82349 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC18.67■□□□□ 0.58
SgcbP82349 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC18.67■□□□□ 0.58
SgcbP82349 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SgcbP82349 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC18.67■□□□□ 0.58
SgcbP82349 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
SgcbP82349 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SgcbP82349 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SgcbP82349 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcbP82349 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
SgcbP82349 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcbP82349 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.65■□□□□ 0.58
SgcbP82349 Gm14117-201ENSMUST00000122417 843 ntBASIC18.65■□□□□ 0.58
SgcbP82349 Gm7417-201ENSMUST00000192950 473 ntBASIC18.65■□□□□ 0.58
SgcbP82349 AC116713.1-201ENSMUST00000215074 430 ntBASIC18.65■□□□□ 0.58
SgcbP82349 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SgcbP82349 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SgcbP82349 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms