Protein–RNA interactions for Protein: P70271

Pdlim4, PDZ and LIM domain protein 4, mousemouse

Predictions only

Length 330 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim4P70271 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim4P70271 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC17.44■□□□□ 0.38
Pdlim4P70271 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim4P70271 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim4P70271 Dynll1-201ENSMUST00000009157 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim4P70271 Emc6-201ENSMUST00000054952 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Pdlim4P70271 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim4P70271 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.43■□□□□ 0.38
Pdlim4P70271 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim4P70271 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim4P70271 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Pdlim4P70271 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC17.43■□□□□ 0.38
Pdlim4P70271 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC17.43■□□□□ 0.38
Pdlim4P70271 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim4P70271 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim4P70271 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim4P70271 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.43■□□□□ 0.38
Pdlim4P70271 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim4P70271 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Pdlim4P70271 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Pdlim4P70271 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC17.42■□□□□ 0.38
Pdlim4P70271 Gse1-203ENSMUST00000120493 4610 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Pdlim4P70271 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC17.41■□□□□ 0.38
Pdlim4P70271 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Pdlim4P70271 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Pdlim4P70271 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Fgf8-206ENSMUST00000111928 1056 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Gm11847-201ENSMUST00000125165 1119 ntBASIC17.4■□□□□ 0.38
Pdlim4P70271 Tfpt-204ENSMUST00000155592 1091 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdlim4P70271 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Pdlim4P70271 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
Pdlim4P70271 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Sac3d1-201ENSMUST00000113533 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Pdlim4P70271 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Pdlim4P70271 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
Pdlim4P70271 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdlim4P70271 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.38
Pdlim4P70271 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim4P70271 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim4P70271 4930524J08Rik-201ENSMUST00000046721 603 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Pdlim4P70271 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC17.39■□□□□ 0.37
Pdlim4P70271 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.39■□□□□ 0.37
Pdlim4P70271 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim4P70271 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Pdlim4P70271 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.38■□□□□ 0.37
Pdlim4P70271 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Pdlim4P70271 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Pdlim4P70271 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Gm5812-201ENSMUST00000061073 957 ntBASIC17.38■□□□□ 0.37
Pdlim4P70271 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Pdlim4P70271 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim4P70271 Gm10653-201ENSMUST00000132250 1232 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim4P70271 Gm10653-203ENSMUST00000156423 1232 ntTSL 5 BASIC17.37■□□□□ 0.37
Pdlim4P70271 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim4P70271 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim4P70271 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim4P70271 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Pdlim4P70271 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Pdlim4P70271 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Pdlim4P70271 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim4P70271 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC17.35■□□□□ 0.37
Pdlim4P70271 Gm16464-201ENSMUST00000117815 1095 ntBASIC17.35■□□□□ 0.37
Pdlim4P70271 Gm15820-201ENSMUST00000201566 728 ntBASIC17.35■□□□□ 0.37
Pdlim4P70271 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pdlim4P70271 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pdlim4P70271 Gm10232-201ENSMUST00000089221 720 ntBASIC17.35■□□□□ 0.37
Pdlim4P70271 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC17.35■□□□□ 0.37
Pdlim4P70271 Klf1-201ENSMUST00000067060 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim4P70271 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim4P70271 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Pdlim4P70271 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Tcea2-201ENSMUST00000103042 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Pdlim4P70271 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 178.6 ms