Protein–RNA interactions for Protein: P68433

Hist1h3a, Histone H3.1, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h3aP68433 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3aP68433 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3aP68433 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3aP68433 Gm28536-201ENSMUST00000190971 1317 ntBASIC18.38■□□□□ 0.53
Hist1h3aP68433 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC18.38■□□□□ 0.53
Hist1h3aP68433 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Hist1h3aP68433 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
Hist1h3aP68433 Gm43403-201ENSMUST00000198011 1786 ntBASIC18.37■□□□□ 0.53
Hist1h3aP68433 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 AC158990.1-201ENSMUST00000221450 2016 ntBASIC18.37■□□□□ 0.53
Hist1h3aP68433 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 AC164883.3-201ENSMUST00000227396 1774 ntBASIC18.37■□□□□ 0.53
Hist1h3aP68433 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Hist1h3aP68433 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Bpifb4-202ENSMUST00000109757 2420 ntAPPRIS P2 TSL 5 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Atp5j-202ENSMUST00000114191 742 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Gm11847-201ENSMUST00000125165 1119 ntBASIC18.36■□□□□ 0.53
Hist1h3aP68433 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hist1h3aP68433 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Tmem192-203ENSMUST00000209852 1193 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Gm45371-201ENSMUST00000210723 459 ntTSL 3 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Hist1h3aP68433 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Tmem147-203ENSMUST00000207296 875 ntTSL 3 BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Gm5921-201ENSMUST00000075898 882 ntBASIC18.35■□□□□ 0.53
Hist1h3aP68433 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Hist1h3aP68433 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 4833418N17Rik-201ENSMUST00000064826 615 ntBASIC18.34■□□□□ 0.53
Hist1h3aP68433 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Hist1h3aP68433 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hist1h3aP68433 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Hist1h3aP68433 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC18.33■□□□□ 0.52
Hist1h3aP68433 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hist1h3aP68433 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Hist1h3aP68433 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hist1h3aP68433 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Hist1h3aP68433 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Hist1h3aP68433 Gm13238-201ENSMUST00000117655 780 ntBASIC18.32■□□□□ 0.52
Hist1h3aP68433 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
Hist1h3aP68433 Btbd6-206ENSMUST00000222209 644 ntTSL 3 BASIC18.32■□□□□ 0.52
Hist1h3aP68433 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h3aP68433 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Hist1h3aP68433 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h3aP68433 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Hist1h3aP68433 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h3aP68433 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC18.31■□□□□ 0.52
Hist1h3aP68433 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h3aP68433 Gm43566-201ENSMUST00000196851 808 ntBASIC18.31■□□□□ 0.52
Hist1h3aP68433 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h3aP68433 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h3aP68433 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h3aP68433 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Hist1h3aP68433 Cpeb3-205ENSMUST00000126781 2095 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h3aP68433 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h3aP68433 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Hist1h3aP68433 Ube2k-204ENSMUST00000201292 1529 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h3aP68433 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC18.3■□□□□ 0.52
Hist1h3aP68433 Gm8093-201ENSMUST00000128935 1892 ntBASIC18.3■□□□□ 0.52
Hist1h3aP68433 Klf15-201ENSMUST00000032174 2373 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Hist1h3aP68433 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Ankrd54-201ENSMUST00000040676 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h3aP68433 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Zfand2b-204ENSMUST00000160439 1206 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC18.29■□□□□ 0.52
Hist1h3aP68433 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h3aP68433 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h3aP68433 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h3aP68433 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Hist1h3aP68433 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Hist1h3aP68433 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 9.9 ms