Protein–RNA interactions for Protein: P54823

Ddx6, Probable ATP-dependent RNA helicase DDX6, mousemouse

Known RBP Predictions only

Length 483 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx6P54823 Sdccag3-201ENSMUST00000028293 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ddx6P54823 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx6P54823 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx6P54823 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC21.55■■□□□ 1.04
Ddx6P54823 Gm9870-201ENSMUST00000063874 645 ntBASIC21.55■■□□□ 1.04
Ddx6P54823 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC21.55■■□□□ 1.04
Ddx6P54823 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx6P54823 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx6P54823 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.55■■□□□ 1.04
Ddx6P54823 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Ddx6P54823 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx6P54823 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC21.54■■□□□ 1.04
Ddx6P54823 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
Ddx6P54823 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx6P54823 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx6P54823 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx6P54823 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Ddx6P54823 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
Ddx6P54823 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC21.52■■□□□ 1.04
Ddx6P54823 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.52■■□□□ 1.04
Ddx6P54823 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx6P54823 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx6P54823 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx6P54823 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.04
Ddx6P54823 Gm27454-201ENSMUST00000185090 204 ntBASIC21.52■■□□□ 1.04
Ddx6P54823 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC21.52■■□□□ 1.04
Ddx6P54823 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx6P54823 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx6P54823 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Ddx6P54823 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.52■■□□□ 1.03
Ddx6P54823 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.51■■□□□ 1.03
Ddx6P54823 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx6P54823 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx6P54823 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Ddx6P54823 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
Ddx6P54823 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx6P54823 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx6P54823 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC21.5■■□□□ 1.03
Ddx6P54823 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx6P54823 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Ddx6P54823 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
Ddx6P54823 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx6P54823 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx6P54823 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx6P54823 C1qc-201ENSMUST00000046332 1203 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx6P54823 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Ddx6P54823 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC21.48■■□□□ 1.03
Ddx6P54823 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 Ttc39b-201ENSMUST00000030205 842 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 Oaz1-201ENSMUST00000060987 1071 ntAPPRIS ALT1 TSL 5 BASIC21.48■■□□□ 1.03
Ddx6P54823 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Ddx6P54823 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ddx6P54823 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.48■■□□□ 1.03
Ddx6P54823 Wtap-203ENSMUST00000159551 2060 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
Ddx6P54823 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx6P54823 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx6P54823 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
Ddx6P54823 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx6P54823 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx6P54823 Gm9207-201ENSMUST00000198773 1115 ntBASIC21.47■■□□□ 1.03
Ddx6P54823 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx6P54823 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Ddx6P54823 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
Ddx6P54823 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
Ddx6P54823 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx6P54823 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC21.46■■□□□ 1.03
Ddx6P54823 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx6P54823 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC21.46■■□□□ 1.03
Ddx6P54823 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ddx6P54823 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
Ddx6P54823 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx6P54823 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx6P54823 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Ddx6P54823 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx6P54823 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx6P54823 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx6P54823 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.45■■□□□ 1.02
Ddx6P54823 Pth2-202ENSMUST00000210086 481 ntTSL 2 BASIC21.45■■□□□ 1.02
Ddx6P54823 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx6P54823 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx6P54823 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Ddx6P54823 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Ier3ip1-201ENSMUST00000026487 1395 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC21.44■■□□□ 1.02
Ddx6P54823 AC115037.1-201ENSMUST00000223391 2173 ntBASIC21.44■■□□□ 1.02
Ddx6P54823 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Uchl5-206ENSMUST00000189936 1696 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
Ddx6P54823 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx6P54823 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx6P54823 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Ddx6P54823 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC21.43■■□□□ 1.02
Ddx6P54823 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms