Protein–RNA interactions for Protein: P54276

Msh6, DNA mismatch repair protein Msh6, mousemouse

Known RBP Predictions only

Length 1,358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh6P54276 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
Msh6P54276 Krtap5-2-201ENSMUST00000067978 937 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
Msh6P54276 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
Msh6P54276 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC27.15■■□□□ 1.94
Msh6P54276 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC27.15■■□□□ 1.94
Msh6P54276 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
Msh6P54276 Mmadhc-201ENSMUST00000102769 1342 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Msh6P54276 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
Msh6P54276 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC27.14■■□□□ 1.94
Msh6P54276 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
Msh6P54276 Kcna3-201ENSMUST00000052718 1902 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Msh6P54276 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Msh6P54276 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Msh6P54276 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC27.13■■□□□ 1.93
Msh6P54276 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC27.13■■□□□ 1.93
Msh6P54276 Cdv3-ps-201ENSMUST00000169632 827 ntBASIC27.13■■□□□ 1.93
Msh6P54276 9530036O11Rik-201ENSMUST00000180878 876 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Msh6P54276 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Msh6P54276 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
Msh6P54276 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC27.12■■□□□ 1.93
Msh6P54276 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC27.12■■□□□ 1.93
Msh6P54276 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Msh6P54276 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC27.11■■□□□ 1.93
Msh6P54276 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC27.11■■□□□ 1.93
Msh6P54276 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC27.1■■□□□ 1.93
Msh6P54276 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC27.1■■□□□ 1.93
Msh6P54276 Gm10620-201ENSMUST00000098379 1332 ntBASIC27.1■■□□□ 1.93
Msh6P54276 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC27.09■■□□□ 1.93
Msh6P54276 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Msh6P54276 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC27.09■■□□□ 1.93
Msh6P54276 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC27.08■■□□□ 1.93
Msh6P54276 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Msh6P54276 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC27.08■■□□□ 1.93
Msh6P54276 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC27.08■■□□□ 1.93
Msh6P54276 Gm5297-201ENSMUST00000198555 1171 ntBASIC27.08■■□□□ 1.93
Msh6P54276 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
Msh6P54276 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
Msh6P54276 Slc35b2-207ENSMUST00000226086 850 ntBASIC27.07■■□□□ 1.92
Msh6P54276 AC158990.1-201ENSMUST00000221450 2016 ntBASIC27.07■■□□□ 1.92
Msh6P54276 Ispd-204ENSMUST00000221452 1924 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
Msh6P54276 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC27.06■■□□□ 1.92
Msh6P54276 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
Msh6P54276 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 Chml-203ENSMUST00000210367 1324 ntTSL 5 BASIC27.05■■□□□ 1.92
Msh6P54276 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC27.05■■□□□ 1.92
Msh6P54276 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC27.05■■□□□ 1.92
Msh6P54276 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC27.05■■□□□ 1.92
Msh6P54276 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
Msh6P54276 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC27.05■■□□□ 1.92
Msh6P54276 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC27.04■■□□□ 1.92
Msh6P54276 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Msh6P54276 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Msh6P54276 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC27.04■■□□□ 1.92
Msh6P54276 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Msh6P54276 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC27.04■■□□□ 1.92
Msh6P54276 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC27.03■■□□□ 1.92
Msh6P54276 Tmem59-202ENSMUST00000106753 1148 ntTSL 5 BASIC27.03■■□□□ 1.92
Msh6P54276 AC153962.1-201ENSMUST00000218530 1948 ntBASIC27.03■■□□□ 1.92
Msh6P54276 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Msh6P54276 Tm2d1-202ENSMUST00000102793 1027 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Msh6P54276 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Msh6P54276 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.92
Msh6P54276 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Msh6P54276 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
Msh6P54276 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.92
Msh6P54276 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Msh6P54276 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
Msh6P54276 Erh-201ENSMUST00000021559 1293 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Msh6P54276 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC27.01■■□□□ 1.91
Msh6P54276 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Msh6P54276 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
Msh6P54276 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC27■■□□□ 1.91
Msh6P54276 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC27■■□□□ 1.91
Msh6P54276 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC27■■□□□ 1.91
Msh6P54276 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Msh6P54276 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
Msh6P54276 E130307A14Rik-202ENSMUST00000133302 438 ntTSL 5 BASIC26.99■■□□□ 1.91
Msh6P54276 4930539J05Rik-202ENSMUST00000182865 511 ntTSL 2 BASIC26.99■■□□□ 1.91
Msh6P54276 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC26.99■■□□□ 1.91
Msh6P54276 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC26.99■■□□□ 1.91
Msh6P54276 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
Msh6P54276 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC26.98■■□□□ 1.91
Msh6P54276 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
Msh6P54276 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Msh6P54276 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Msh6P54276 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
Msh6P54276 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC26.97■■□□□ 1.91
Msh6P54276 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Msh6P54276 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Msh6P54276 C1ql2-201ENSMUST00000037286 2000 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
Msh6P54276 Cdkl3-205ENSMUST00000109078 2216 ntAPPRIS ALT2 TSL 1 (best) BASIC26.97■■□□□ 1.91
Msh6P54276 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC26.97■■□□□ 1.91
Msh6P54276 0610039K10Rik-202ENSMUST00000184724 952 ntBASIC26.97■■□□□ 1.91
Msh6P54276 Gm8495-201ENSMUST00000188740 694 ntBASIC26.97■■□□□ 1.91
Msh6P54276 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC26.96■■□□□ 1.91
Retrieved 100 of 76,532 protein–RNA pairs in 12.5 ms