Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RoraP51448 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RoraP51448 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 Efr3a-203ENSMUST00000172756 1411 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 Pou2f2-204ENSMUST00000108416 1754 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RoraP51448 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC19.85■□□□□ 0.77
RoraP51448 Atp6v1f-201ENSMUST00000004396 703 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 Polr1d-201ENSMUST00000050970 1196 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RoraP51448 Pkp2-203ENSMUST00000162150 1959 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.84■□□□□ 0.77
RoraP51448 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.84■□□□□ 0.77
RoraP51448 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
RoraP51448 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RoraP51448 Gm10642-201ENSMUST00000098589 1610 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RoraP51448 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Hoxa11-201ENSMUST00000048026 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Gm10620-201ENSMUST00000098379 1332 ntBASIC19.83■□□□□ 0.77
RoraP51448 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Ssr2-201ENSMUST00000035785 1189 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RoraP51448 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RoraP51448 2700081O15Rik-202ENSMUST00000159348 4989 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
RoraP51448 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RoraP51448 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.82■□□□□ 0.76
RoraP51448 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RoraP51448 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC19.82■□□□□ 0.76
RoraP51448 Dusp1-201ENSMUST00000025025 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RoraP51448 Specc1-206ENSMUST00000201015 1789 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
RoraP51448 Dhrs13-201ENSMUST00000021187 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RoraP51448 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
RoraP51448 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC19.82■□□□□ 0.76
RoraP51448 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RoraP51448 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
RoraP51448 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
RoraP51448 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.81■□□□□ 0.76
RoraP51448 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
RoraP51448 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RoraP51448 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RoraP51448 Timm8a1-201ENSMUST00000054213 1421 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RoraP51448 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
RoraP51448 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
RoraP51448 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
RoraP51448 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC19.81■□□□□ 0.76
RoraP51448 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RoraP51448 Lypla2-201ENSMUST00000067567 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RoraP51448 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
RoraP51448 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RoraP51448 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RoraP51448 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RoraP51448 Xbp1-201ENSMUST00000063084 2129 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
RoraP51448 Gm13241-201ENSMUST00000094493 780 ntBASIC19.8■□□□□ 0.76
RoraP51448 Peli3-201ENSMUST00000025834 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
RoraP51448 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
RoraP51448 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
RoraP51448 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.79■□□□□ 0.76
RoraP51448 Cep97-205ENSMUST00000121703 609 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RoraP51448 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC19.79■□□□□ 0.76
RoraP51448 Gm17324-201ENSMUST00000165499 922 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
RoraP51448 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RoraP51448 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.79■□□□□ 0.76
RoraP51448 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.79■□□□□ 0.76
RoraP51448 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
RoraP51448 Ccdc85c-201ENSMUST00000136175 1302 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
RoraP51448 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RoraP51448 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
RoraP51448 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
RoraP51448 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RoraP51448 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RoraP51448 Gm9847-201ENSMUST00000052528 599 ntBASIC19.78■□□□□ 0.76
RoraP51448 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
RoraP51448 Tead2-202ENSMUST00000097216 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
RoraP51448 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RoraP51448 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC19.77■□□□□ 0.76
RoraP51448 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.77■□□□□ 0.76
RoraP51448 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
RoraP51448 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RoraP51448 Letm2-209ENSMUST00000210810 1538 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RoraP51448 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
RoraP51448 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
RoraP51448 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
RoraP51448 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC19.76■□□□□ 0.75
RoraP51448 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
RoraP51448 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
RoraP51448 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
RoraP51448 Fndc4-201ENSMUST00000041266 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RoraP51448 Gm12922-201ENSMUST00000120626 809 ntBASIC19.75■□□□□ 0.75
RoraP51448 Snrpa1-206ENSMUST00000153609 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
RoraP51448 Pbx1-201ENSMUST00000064438 1020 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
RoraP51448 AC115037.1-201ENSMUST00000223391 2173 ntBASIC19.75■□□□□ 0.75
RoraP51448 Krt72-201ENSMUST00000071104 1951 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 15.1 ms