Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Adat3-204ENSMUST00000038411 1411 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Ctxn1-201ENSMUST00000053252 1212 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Hist1h1aP43275 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Hist1h1aP43275 A430027H14Rik-201ENSMUST00000191809 1467 ntBASIC17.24■□□□□ 0.35
Hist1h1aP43275 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Fezf2-201ENSMUST00000022262 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 1700016H13Rik-204ENSMUST00000120688 612 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Hist1h1aP43275 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Hist1h1aP43275 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC17.23■□□□□ 0.35
Hist1h1aP43275 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Ppp1r14a-202ENSMUST00000207714 755 ntTSL 3 BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Ppp1r14a-201ENSMUST00000048187 950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 1700034H15Rik-201ENSMUST00000069573 1461 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Hist1h1aP43275 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Homer1-206ENSMUST00000109493 2580 ntTSL 5 BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Hist1h1aP43275 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1aP43275 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1aP43275 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1aP43275 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1aP43275 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Hist1h1aP43275 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC17.21■□□□□ 0.34
Hist1h1aP43275 Kdm1a-203ENSMUST00000116273 3008 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
Hist1h1aP43275 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1aP43275 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1aP43275 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1aP43275 Anp32b-201ENSMUST00000102926 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1aP43275 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Hist1h1aP43275 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1aP43275 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1aP43275 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1aP43275 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1aP43275 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Hist1h1aP43275 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Btbd6-204ENSMUST00000221104 2085 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC17.18■□□□□ 0.34
Hist1h1aP43275 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Hist1h1aP43275 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1aP43275 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.17■□□□□ 0.34
Hist1h1aP43275 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1aP43275 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1aP43275 Nle1-201ENSMUST00000103213 1783 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1aP43275 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Hist1h1aP43275 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1aP43275 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1aP43275 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC17.16■□□□□ 0.34
Hist1h1aP43275 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1aP43275 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1aP43275 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Hist1h1aP43275 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Gm42418-201ENSMUST00000182010 1831 ntBASIC17.15■□□□□ 0.34
Hist1h1aP43275 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Galr3-201ENSMUST00000058004 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Ube4b-202ENSMUST00000103212 5626 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Hist1h1aP43275 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Hist1h1aP43275 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms