Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
HmgclP38060 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
HmgclP38060 Gm20634-201ENSMUST00000090779 2956 ntBASIC20.83■□□□□ 0.92
HmgclP38060 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HmgclP38060 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
HmgclP38060 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
HmgclP38060 Msx3-202ENSMUST00000172775 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HmgclP38060 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.82■□□□□ 0.92
HmgclP38060 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
HmgclP38060 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HmgclP38060 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HmgclP38060 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
HmgclP38060 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
HmgclP38060 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.81■□□□□ 0.92
HmgclP38060 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HmgclP38060 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
HmgclP38060 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
HmgclP38060 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HmgclP38060 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.81■□□□□ 0.92
HmgclP38060 Gm43403-201ENSMUST00000198011 1786 ntBASIC20.81■□□□□ 0.92
HmgclP38060 Kctd20-201ENSMUST00000057174 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
HmgclP38060 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC20.81■□□□□ 0.92
HmgclP38060 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HmgclP38060 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HmgclP38060 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
HmgclP38060 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HmgclP38060 Barhl1-202ENSMUST00000113847 2160 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
HmgclP38060 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
HmgclP38060 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HmgclP38060 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HmgclP38060 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Best2-202ENSMUST00000209322 1944 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC20.79■□□□□ 0.92
HmgclP38060 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
HmgclP38060 Hopx-203ENSMUST00000120827 1217 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 AC102554.1-201ENSMUST00000216236 537 ntTSL 5 BASIC20.79■□□□□ 0.92
HmgclP38060 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 C1qtnf5-204ENSMUST00000114821 1365 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
HmgclP38060 Whrn-208ENSMUST00000119294 2632 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
HmgclP38060 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HmgclP38060 Ugp2-201ENSMUST00000060895 2044 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HmgclP38060 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HmgclP38060 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
HmgclP38060 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
HmgclP38060 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.78■□□□□ 0.92
HmgclP38060 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HmgclP38060 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
HmgclP38060 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
HmgclP38060 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
HmgclP38060 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
HmgclP38060 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
HmgclP38060 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HmgclP38060 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
HmgclP38060 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
HmgclP38060 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
HmgclP38060 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
HmgclP38060 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC20.75■□□□□ 0.91
HmgclP38060 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HmgclP38060 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HmgclP38060 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
HmgclP38060 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC20.75■□□□□ 0.91
HmgclP38060 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC20.75■□□□□ 0.91
HmgclP38060 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
HmgclP38060 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
HmgclP38060 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
HmgclP38060 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HmgclP38060 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HmgclP38060 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
HmgclP38060 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HmgclP38060 Gm10232-201ENSMUST00000089221 720 ntBASIC20.74■□□□□ 0.91
HmgclP38060 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
HmgclP38060 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
HmgclP38060 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HmgclP38060 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
HmgclP38060 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.73■□□□□ 0.91
HmgclP38060 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
HmgclP38060 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
HmgclP38060 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
HmgclP38060 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
HmgclP38060 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HmgclP38060 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HmgclP38060 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HmgclP38060 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC20.72■□□□□ 0.91
HmgclP38060 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
HmgclP38060 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.72■□□□□ 0.91
HmgclP38060 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HmgclP38060 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
HmgclP38060 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HmgclP38060 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC20.72■□□□□ 0.91
HmgclP38060 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.71■□□□□ 0.91
HmgclP38060 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HmgclP38060 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HmgclP38060 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC20.71■□□□□ 0.91
HmgclP38060 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
HmgclP38060 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
HmgclP38060 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms