Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC22.87■■□□□ 1.25
Pde6bP23440 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC22.87■■□□□ 1.25
Pde6bP23440 Nsmf-213ENSMUST00000140737 862 ntTSL 5 BASIC22.87■■□□□ 1.25
Pde6bP23440 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC22.87■■□□□ 1.25
Pde6bP23440 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pde6bP23440 Slc36a1-201ENSMUST00000020499 1950 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pde6bP23440 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pde6bP23440 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pde6bP23440 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pde6bP23440 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pde6bP23440 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC22.86■■□□□ 1.25
Pde6bP23440 E130311K13Rik-201ENSMUST00000061706 1640 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pde6bP23440 Appbp2os-202ENSMUST00000206972 447 ntBASIC22.85■■□□□ 1.25
Pde6bP23440 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pde6bP23440 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pde6bP23440 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pde6bP23440 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pde6bP23440 Zc3h8-201ENSMUST00000028866 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pde6bP23440 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC22.84■■□□□ 1.25
Pde6bP23440 Tcte2-201ENSMUST00000053376 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pde6bP23440 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.84■■□□□ 1.25
Pde6bP23440 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pde6bP23440 Ppp1r12c-201ENSMUST00000013886 2983 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pde6bP23440 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pde6bP23440 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
Pde6bP23440 H2afy-201ENSMUST00000016081 2046 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
Pde6bP23440 Ppp1r12b-203ENSMUST00000112163 828 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
Pde6bP23440 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC22.83■■□□□ 1.25
Pde6bP23440 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC22.83■■□□□ 1.25
Pde6bP23440 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC22.83■■□□□ 1.25
Pde6bP23440 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC22.83■■□□□ 1.24
Pde6bP23440 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Pde6bP23440 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pde6bP23440 G630030J09Rik-201ENSMUST00000181958 2135 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
Pde6bP23440 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
Pde6bP23440 Gm12821-201ENSMUST00000120022 600 ntBASIC22.82■■□□□ 1.24
Pde6bP23440 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC22.82■■□□□ 1.24
Pde6bP23440 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pde6bP23440 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pde6bP23440 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pde6bP23440 Gm6277-202ENSMUST00000224036 2779 ntBASIC22.82■■□□□ 1.24
Pde6bP23440 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
Pde6bP23440 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Pde6bP23440 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pde6bP23440 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Pde6bP23440 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC22.81■■□□□ 1.24
Pde6bP23440 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC22.81■■□□□ 1.24
Pde6bP23440 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC22.81■■□□□ 1.24
Pde6bP23440 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.81■■□□□ 1.24
Pde6bP23440 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC22.81■■□□□ 1.24
Pde6bP23440 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pde6bP23440 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pde6bP23440 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC22.8■■□□□ 1.24
Pde6bP23440 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pde6bP23440 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC22.8■■□□□ 1.24
Pde6bP23440 Ooep-201ENSMUST00000034900 2138 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pde6bP23440 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC22.79■■□□□ 1.24
Pde6bP23440 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pde6bP23440 Msrb1-201ENSMUST00000101800 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pde6bP23440 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC22.79■■□□□ 1.24
Pde6bP23440 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC22.79■■□□□ 1.24
Pde6bP23440 Golgb1-201ENSMUST00000023534 498 ntBASIC22.79■■□□□ 1.24
Pde6bP23440 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC22.79■■□□□ 1.24
Pde6bP23440 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pde6bP23440 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pde6bP23440 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pde6bP23440 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC22.78■■□□□ 1.24
Pde6bP23440 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC22.78■■□□□ 1.24
Pde6bP23440 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pde6bP23440 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Pde6bP23440 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC22.78■■□□□ 1.24
Pde6bP23440 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Pde6bP23440 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pde6bP23440 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC22.77■■□□□ 1.24
Pde6bP23440 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pde6bP23440 Sox8-202ENSMUST00000173447 928 ntAPPRIS ALT2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pde6bP23440 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC22.77■■□□□ 1.24
Pde6bP23440 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC22.77■■□□□ 1.24
Pde6bP23440 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC22.77■■□□□ 1.24
Pde6bP23440 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pde6bP23440 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Pde6bP23440 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC22.76■■□□□ 1.23
Pde6bP23440 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pde6bP23440 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC22.76■■□□□ 1.23
Pde6bP23440 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC22.76■■□□□ 1.23
Pde6bP23440 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pde6bP23440 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC22.76■■□□□ 1.23
Pde6bP23440 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Pde6bP23440 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pde6bP23440 Ccdc74a-201ENSMUST00000056962 1273 ntAPPRIS P1 TSL 5 BASIC22.75■■□□□ 1.23
Pde6bP23440 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC22.75■■□□□ 1.23
Pde6bP23440 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pde6bP23440 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pde6bP23440 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC22.74■■□□□ 1.23
Pde6bP23440 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Pde6bP23440 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC22.74■■□□□ 1.23
Pde6bP23440 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pde6bP23440 Wrap73-201ENSMUST00000030895 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pde6bP23440 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Pde6bP23440 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.74■■□□□ 1.23
Retrieved 100 of 76,532 protein–RNA pairs in 24.5 ms