Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
BdnfP21237 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BdnfP21237 Stac-201ENSMUST00000035083 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
BdnfP21237 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
BdnfP21237 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
BdnfP21237 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
BdnfP21237 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
BdnfP21237 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
BdnfP21237 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BdnfP21237 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
BdnfP21237 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
BdnfP21237 Dnajc19-203ENSMUST00000117223 1695 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
BdnfP21237 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
BdnfP21237 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC20.03■□□□□ 0.8
BdnfP21237 Fance-204ENSMUST00000114804 1842 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 H2afj-201ENSMUST00000074556 1831 ntAPPRIS P2 BASIC20.02■□□□□ 0.8
BdnfP21237 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
BdnfP21237 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Krt79-201ENSMUST00000023799 2097 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
BdnfP21237 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
BdnfP21237 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
BdnfP21237 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BdnfP21237 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BdnfP21237 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BdnfP21237 Gm14523-201ENSMUST00000117260 558 ntBASIC20.01■□□□□ 0.79
BdnfP21237 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.01■□□□□ 0.79
BdnfP21237 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BdnfP21237 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
BdnfP21237 Btg3-201ENSMUST00000023570 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
BdnfP21237 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
BdnfP21237 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
BdnfP21237 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC20■□□□□ 0.79
BdnfP21237 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC20■□□□□ 0.79
BdnfP21237 Snap91-203ENSMUST00000074501 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BdnfP21237 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
BdnfP21237 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Fndc5-201ENSMUST00000102600 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
BdnfP21237 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Phc2-202ENSMUST00000106079 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
BdnfP21237 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BdnfP21237 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.97■□□□□ 0.79
BdnfP21237 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BdnfP21237 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
BdnfP21237 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
BdnfP21237 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC19.97■□□□□ 0.79
BdnfP21237 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BdnfP21237 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BdnfP21237 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.96■□□□□ 0.79
BdnfP21237 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Gm7332-201ENSMUST00000118351 454 ntBASIC19.96■□□□□ 0.79
BdnfP21237 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC19.96■□□□□ 0.79
BdnfP21237 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Trpc1-201ENSMUST00000053785 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Sft2d3-201ENSMUST00000054984 2810 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
BdnfP21237 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.96■□□□□ 0.79
BdnfP21237 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
BdnfP21237 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
BdnfP21237 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC19.95■□□□□ 0.78
BdnfP21237 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC19.95■□□□□ 0.78
BdnfP21237 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Hras-201ENSMUST00000026572 2828 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
BdnfP21237 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
BdnfP21237 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
BdnfP21237 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
Retrieved 100 of 76,532 protein–RNA pairs in 16 ms