Protein–RNA interactions for Protein: P20033

Pdgfa, Platelet-derived growth factor subunit A, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PdgfaP20033 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC20.74■□□□□ 0.91
PdgfaP20033 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
PdgfaP20033 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
PdgfaP20033 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
PdgfaP20033 AC115037.1-201ENSMUST00000223391 2173 ntBASIC20.73■□□□□ 0.91
PdgfaP20033 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.73■□□□□ 0.91
PdgfaP20033 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfaP20033 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfaP20033 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC20.73■□□□□ 0.91
PdgfaP20033 Uap1-202ENSMUST00000111350 2311 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfaP20033 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfaP20033 Med25-201ENSMUST00000003049 2619 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PdgfaP20033 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfaP20033 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfaP20033 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfaP20033 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfaP20033 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PdgfaP20033 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
PdgfaP20033 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC20.72■□□□□ 0.91
PdgfaP20033 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
PdgfaP20033 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.71■□□□□ 0.91
PdgfaP20033 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
PdgfaP20033 Cdx1-201ENSMUST00000025521 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PdgfaP20033 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PdgfaP20033 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PdgfaP20033 Ankra2-202ENSMUST00000091356 1949 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
PdgfaP20033 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC20.7■□□□□ 0.9
PdgfaP20033 Fbxo24-201ENSMUST00000031732 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfaP20033 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.7■□□□□ 0.9
PdgfaP20033 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfaP20033 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PdgfaP20033 Zfp821-201ENSMUST00000034163 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfaP20033 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfaP20033 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfaP20033 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PdgfaP20033 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfaP20033 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfaP20033 Gm44428-201ENSMUST00000204474 874 ntBASIC20.69■□□□□ 0.9
PdgfaP20033 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC20.69■□□□□ 0.9
PdgfaP20033 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PdgfaP20033 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PdgfaP20033 Hnrnpf-202ENSMUST00000163168 2401 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Zdhhc14-201ENSMUST00000089185 3115 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PdgfaP20033 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Gm6217-201ENSMUST00000222182 829 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PdgfaP20033 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
PdgfaP20033 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfaP20033 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfaP20033 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfaP20033 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfaP20033 Gm13238-201ENSMUST00000117655 780 ntBASIC20.67■□□□□ 0.9
PdgfaP20033 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.67■□□□□ 0.9
PdgfaP20033 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfaP20033 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PdgfaP20033 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
PdgfaP20033 Tab2-204ENSMUST00000146444 4380 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PdgfaP20033 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.66■□□□□ 0.9
PdgfaP20033 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.66■□□□□ 0.9
PdgfaP20033 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfaP20033 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfaP20033 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfaP20033 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PdgfaP20033 Tmem45b-201ENSMUST00000048050 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfaP20033 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.65■□□□□ 0.9
PdgfaP20033 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PdgfaP20033 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PdgfaP20033 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfaP20033 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfaP20033 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfaP20033 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfaP20033 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfaP20033 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PdgfaP20033 Gm28731-201ENSMUST00000185564 1569 ntBASIC20.63■□□□□ 0.89
PdgfaP20033 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfaP20033 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfaP20033 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfaP20033 Ttc14-206ENSMUST00000196975 1711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfaP20033 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC20.63■□□□□ 0.89
PdgfaP20033 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PdgfaP20033 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfaP20033 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfaP20033 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PdgfaP20033 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfaP20033 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
PdgfaP20033 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PdgfaP20033 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 14.2 ms