Protein–RNA interactions for Protein: P02831

Hoxa3, Homeobox protein Hox-A3, mousemouse

Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa3P02831 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa3P02831 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa3P02831 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Hoxa3P02831 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.41
Hoxa3P02831 Gm9934-202ENSMUST00000191246 1713 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxa3P02831 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxa3P02831 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Hoxa3P02831 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC17.58■□□□□ 0.4
Hoxa3P02831 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC17.58■□□□□ 0.4
Hoxa3P02831 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Hoxa3P02831 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Hoxa3P02831 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Tcte2-210ENSMUST00000148430 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 1700018A14Rik-201ENSMUST00000195587 711 ntBASIC17.57■□□□□ 0.4
Hoxa3P02831 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa3P02831 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Hoxa3P02831 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Hoxa3P02831 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa3P02831 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa3P02831 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxa3P02831 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC17.56■□□□□ 0.4
Hoxa3P02831 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Hoxa3P02831 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC17.56■□□□□ 0.4
Hoxa3P02831 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.56■□□□□ 0.4
Hoxa3P02831 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa3P02831 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Hoxa3P02831 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa3P02831 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa3P02831 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa3P02831 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa3P02831 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Hoxa3P02831 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa3P02831 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Hoxa3P02831 Bbc3-201ENSMUST00000002152 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa3P02831 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC17.54■□□□□ 0.4
Hoxa3P02831 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.54■□□□□ 0.4
Hoxa3P02831 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC17.54■□□□□ 0.4
Hoxa3P02831 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa3P02831 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa3P02831 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa3P02831 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa3P02831 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Hoxa3P02831 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Hoxa3P02831 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hoxa3P02831 Gm7417-201ENSMUST00000192950 473 ntBASIC17.53■□□□□ 0.4
Hoxa3P02831 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC17.53■□□□□ 0.4
Hoxa3P02831 Gm40881-201ENSMUST00000223397 166 ntBASIC17.53■□□□□ 0.4
Hoxa3P02831 P2rx2-202ENSMUST00000112478 1632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa3P02831 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
Hoxa3P02831 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa3P02831 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa3P02831 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa3P02831 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa3P02831 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Hoxa3P02831 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa3P02831 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa3P02831 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa3P02831 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa3P02831 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
Hoxa3P02831 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.52■□□□□ 0.4
Hoxa3P02831 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
Hoxa3P02831 Gpx7-202ENSMUST00000184609 331 ntTSL 3 BASIC17.52■□□□□ 0.4
Hoxa3P02831 1700020G03Rik-201ENSMUST00000211264 889 ntBASIC17.52■□□□□ 0.4
Hoxa3P02831 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa3P02831 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC17.52■□□□□ 0.4
Hoxa3P02831 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Hoxa3P02831 Gm26617-201ENSMUST00000180381 4429 ntTSL 3 BASIC17.52■□□□□ 0.39
Hoxa3P02831 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa3P02831 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Hoxa3P02831 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC17.51■□□□□ 0.39
Hoxa3P02831 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Morn4-201ENSMUST00000051772 1816 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Spc24-201ENSMUST00000098942 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Neo1-202ENSMUST00000214547 5414 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Hoxa3P02831 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Hoxa3P02831 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
Hoxa3P02831 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Hoxa3P02831 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxa3P02831 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Hoxa3P02831 Espn-207ENSMUST00000105653 1411 ntTSL 5 BASIC17.49■□□□□ 0.39
Hoxa3P02831 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxa3P02831 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Hoxa3P02831 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxa3P02831 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Hoxa3P02831 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Hoxa3P02831 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Hoxa3P02831 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 70.9 ms