Protein–RNA interactions for Protein: O88696

Clpp, ATP-dependent Clp protease proteolytic subunit, mitochondrial, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClppO88696 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ClppO88696 Cdkn1c-202ENSMUST00000167912 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
ClppO88696 Jund-201ENSMUST00000095267 1668 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
ClppO88696 Dbf4-207ENSMUST00000171808 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Tbc1d10a-201ENSMUST00000041042 1957 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 H3f3a-207ENSMUST00000162814 724 ntAPPRIS P2 TSL 3 BASIC20.38■□□□□ 0.85
ClppO88696 Rab24-201ENSMUST00000035242 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
ClppO88696 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Gm11847-201ENSMUST00000125165 1119 ntBASIC20.37■□□□□ 0.85
ClppO88696 Gm27253-201ENSMUST00000183670 367 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Tmem160-201ENSMUST00000019302 815 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC20.37■□□□□ 0.85
ClppO88696 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC20.37■□□□□ 0.85
ClppO88696 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
ClppO88696 Hnrnpa3-201ENSMUST00000090792 1140 ntAPPRIS P3 TSL 5 BASIC20.37■□□□□ 0.85
ClppO88696 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Ythdf1-201ENSMUST00000037299 3184 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Plpp1-201ENSMUST00000016144 1598 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
ClppO88696 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Cdk18-202ENSMUST00000112362 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ClppO88696 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
ClppO88696 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Gm26766-202ENSMUST00000227544 2347 ntBASIC20.36■□□□□ 0.85
ClppO88696 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Tmem74b-201ENSMUST00000060196 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
ClppO88696 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClppO88696 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClppO88696 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
ClppO88696 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
ClppO88696 Gm40881-201ENSMUST00000223397 166 ntBASIC20.35■□□□□ 0.85
ClppO88696 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ClppO88696 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC20.35■□□□□ 0.85
ClppO88696 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
ClppO88696 Klhdc2-201ENSMUST00000021362 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClppO88696 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClppO88696 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.34■□□□□ 0.85
ClppO88696 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC20.34■□□□□ 0.85
ClppO88696 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClppO88696 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
ClppO88696 Dlk2-204ENSMUST00000170271 1783 ntTSL 5 BASIC20.34■□□□□ 0.85
ClppO88696 Mettl24-201ENSMUST00000058747 1529 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClppO88696 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
ClppO88696 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC20.33■□□□□ 0.85
ClppO88696 Gm10399-202ENSMUST00000202768 748 ntBASIC20.33■□□□□ 0.85
ClppO88696 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClppO88696 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClppO88696 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
ClppO88696 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClppO88696 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC20.32■□□□□ 0.84
ClppO88696 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC20.32■□□□□ 0.84
ClppO88696 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ClppO88696 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClppO88696 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClppO88696 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ClppO88696 Acsl3-203ENSMUST00000134566 2492 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ClppO88696 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.31■□□□□ 0.84
ClppO88696 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ClppO88696 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.31■□□□□ 0.84
ClppO88696 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClppO88696 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
ClppO88696 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClppO88696 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClppO88696 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClppO88696 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC20.3■□□□□ 0.84
ClppO88696 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClppO88696 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
ClppO88696 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
ClppO88696 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClppO88696 Gtf2h2-202ENSMUST00000066984 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClppO88696 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC20.29■□□□□ 0.84
ClppO88696 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClppO88696 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
ClppO88696 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
ClppO88696 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC20.28■□□□□ 0.84
ClppO88696 Gabbr1-209ENSMUST00000174456 1595 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ClppO88696 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
ClppO88696 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
ClppO88696 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
ClppO88696 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC20.27■□□□□ 0.84
ClppO88696 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ClppO88696 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClppO88696 Siglecf-206ENSMUST00000206299 2149 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClppO88696 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ClppO88696 Gm10685-201ENSMUST00000196120 433 ntTSL 3 BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 74.1 ms