Protein–RNA interactions for Protein: O88575

Slc6a20b, Sodium- and chloride-dependent transporter XTRP3B, mousemouse

Predictions only

Length 635 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a20bO88575 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Slc6a20bO88575 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC23.3■■□□□ 1.32
Slc6a20bO88575 Rtn4rl2-201ENSMUST00000054514 1263 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Slc6a20bO88575 Opn3-201ENSMUST00000027809 1913 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc6a20bO88575 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc6a20bO88575 Podxl2-210ENSMUST00000145944 2065 ntAPPRIS ALT2 TSL 5 BASIC23.29■■□□□ 1.32
Slc6a20bO88575 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.29■■□□□ 1.32
Slc6a20bO88575 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc6a20bO88575 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.29■■□□□ 1.32
Slc6a20bO88575 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Slc6a20bO88575 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20bO88575 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC23.28■■□□□ 1.32
Slc6a20bO88575 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20bO88575 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Slc6a20bO88575 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20bO88575 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20bO88575 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20bO88575 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20bO88575 Krt8-ps-201ENSMUST00000208495 945 ntBASIC23.27■■□□□ 1.32
Slc6a20bO88575 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Slc6a20bO88575 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC23.27■■□□□ 1.32
Slc6a20bO88575 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.31
Slc6a20bO88575 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC23.26■■□□□ 1.31
Slc6a20bO88575 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 Gm7291-201ENSMUST00000199147 382 ntBASIC23.26■■□□□ 1.31
Slc6a20bO88575 Wdr70-203ENSMUST00000227371 1130 ntBASIC23.26■■□□□ 1.31
Slc6a20bO88575 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC23.26■■□□□ 1.31
Slc6a20bO88575 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Slc6a20bO88575 D030056L22Rik-202ENSMUST00000062753 1677 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20bO88575 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20bO88575 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20bO88575 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20bO88575 Prr3-204ENSMUST00000172900 439 ntTSL 2 BASIC23.25■■□□□ 1.31
Slc6a20bO88575 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20bO88575 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Slc6a20bO88575 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC23.24■■□□□ 1.31
Slc6a20bO88575 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Slc6a20bO88575 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
Slc6a20bO88575 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.22■■□□□ 1.31
Slc6a20bO88575 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20bO88575 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20bO88575 Fbxl5-205ENSMUST00000121736 2144 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20bO88575 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC23.22■■□□□ 1.31
Slc6a20bO88575 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC23.22■■□□□ 1.31
Slc6a20bO88575 Kazald1-201ENSMUST00000026234 1380 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20bO88575 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Slc6a20bO88575 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Irf5-201ENSMUST00000004392 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Slc6a20bO88575 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a20bO88575 Srp19-202ENSMUST00000119329 613 ntTSL 2 BASIC23.2■■□□□ 1.3
Slc6a20bO88575 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC23.2■■□□□ 1.3
Slc6a20bO88575 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a20bO88575 E030030I06Rik-201ENSMUST00000069372 876 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a20bO88575 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
Slc6a20bO88575 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC23.19■■□□□ 1.3
Slc6a20bO88575 C2cd4a-201ENSMUST00000054500 1395 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Gm43173-201ENSMUST00000202246 593 ntBASIC23.19■■□□□ 1.3
Slc6a20bO88575 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Slc6a20bO88575 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
Slc6a20bO88575 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC23.18■■□□□ 1.3
Slc6a20bO88575 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC23.18■■□□□ 1.3
Slc6a20bO88575 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC23.18■■□□□ 1.3
Slc6a20bO88575 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc6a20bO88575 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Slc6a20bO88575 AC158990.1-201ENSMUST00000221450 2016 ntBASIC23.17■■□□□ 1.3
Slc6a20bO88575 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Slc6a20bO88575 Gm26571-201ENSMUST00000181399 666 ntBASIC23.17■■□□□ 1.3
Slc6a20bO88575 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC23.17■■□□□ 1.3
Slc6a20bO88575 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a20bO88575 4933440N22Rik-202ENSMUST00000204444 1952 ntBASIC23.16■■□□□ 1.3
Slc6a20bO88575 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a20bO88575 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a20bO88575 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Slc6a20bO88575 Gm5576-201ENSMUST00000075809 1236 ntBASIC23.16■■□□□ 1.3
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms