Protein–RNA interactions for Protein: O88427

Cacna1h, Voltage-dependent T-type calcium channel subunit alpha-1H, mousemouse

Predictions only

Length 2,365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1hO88427 Nespas-201ENSMUST00000143738 1083 ntBASIC21.05■□□□□ 0.96
Cacna1hO88427 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1hO88427 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1hO88427 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC21.05■□□□□ 0.96
Cacna1hO88427 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1hO88427 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1hO88427 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC21.05■□□□□ 0.96
Cacna1hO88427 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1hO88427 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cacna1hO88427 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1hO88427 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1hO88427 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1hO88427 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC21.04■□□□□ 0.96
Cacna1hO88427 Camk1-201ENSMUST00000032409 1496 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1hO88427 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cacna1hO88427 Pdp1-201ENSMUST00000056050 1881 ntAPPRIS P3 TSL 5 BASIC21.03■□□□□ 0.96
Cacna1hO88427 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1hO88427 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC21.03■□□□□ 0.96
Cacna1hO88427 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC21.03■□□□□ 0.96
Cacna1hO88427 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1hO88427 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1hO88427 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1hO88427 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1hO88427 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cacna1hO88427 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cacna1hO88427 Gm5576-201ENSMUST00000075809 1236 ntBASIC21.02■□□□□ 0.96
Cacna1hO88427 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
Cacna1hO88427 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.01■□□□□ 0.95
Cacna1hO88427 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
Cacna1hO88427 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1hO88427 Gm10657-201ENSMUST00000193528 1031 ntBASIC21.01■□□□□ 0.95
Cacna1hO88427 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC21.01■□□□□ 0.95
Cacna1hO88427 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1hO88427 Ptf1a-201ENSMUST00000028068 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cacna1hO88427 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC21■□□□□ 0.95
Cacna1hO88427 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC21■□□□□ 0.95
Cacna1hO88427 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cacna1hO88427 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC21■□□□□ 0.95
Cacna1hO88427 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC21■□□□□ 0.95
Cacna1hO88427 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cacna1hO88427 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1hO88427 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cacna1hO88427 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC20.99■□□□□ 0.95
Cacna1hO88427 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC20.99■□□□□ 0.95
Cacna1hO88427 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
Cacna1hO88427 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1hO88427 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC20.98■□□□□ 0.95
Cacna1hO88427 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1hO88427 AC117245.4-201ENSMUST00000217388 1646 ntBASIC20.98■□□□□ 0.95
Cacna1hO88427 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cacna1hO88427 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1hO88427 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC20.97■□□□□ 0.95
Cacna1hO88427 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1hO88427 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.97■□□□□ 0.95
Cacna1hO88427 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC20.97■□□□□ 0.95
Cacna1hO88427 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cacna1hO88427 Mrfap1-201ENSMUST00000068795 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1hO88427 Gm9870-201ENSMUST00000063874 645 ntBASIC20.96■□□□□ 0.95
Cacna1hO88427 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1hO88427 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1hO88427 Cnpy3-202ENSMUST00000121671 561 ntTSL 2 BASIC20.96■□□□□ 0.95
Cacna1hO88427 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cacna1hO88427 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cacna1hO88427 Txnrd2-216ENSMUST00000206606 1809 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1hO88427 Cars2-201ENSMUST00000049461 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1hO88427 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1hO88427 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC20.95■□□□□ 0.94
Cacna1hO88427 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1hO88427 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC20.95■□□□□ 0.94
Cacna1hO88427 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1hO88427 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cacna1hO88427 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Cacna1hO88427 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1hO88427 Gm10602-201ENSMUST00000098239 609 ntBASIC20.94■□□□□ 0.94
Cacna1hO88427 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1hO88427 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1hO88427 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cacna1hO88427 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cacna1hO88427 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cacna1hO88427 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC20.93■□□□□ 0.94
Cacna1hO88427 Gm27151-202ENSMUST00000185015 1145 ntTSL 5 BASIC20.93■□□□□ 0.94
Cacna1hO88427 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1hO88427 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.92■□□□□ 0.94
Cacna1hO88427 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1hO88427 Gm44949-201ENSMUST00000206423 1450 ntBASIC20.92■□□□□ 0.94
Cacna1hO88427 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC20.92■□□□□ 0.94
Cacna1hO88427 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC20.92■□□□□ 0.94
Cacna1hO88427 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cacna1hO88427 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1hO88427 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cacna1hO88427 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1hO88427 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1hO88427 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
Cacna1hO88427 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Cacna1hO88427 Amer2-203ENSMUST00000225247 2662 ntBASIC20.91■□□□□ 0.94
Cacna1hO88427 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacna1hO88427 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacna1hO88427 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Cacna1hO88427 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
Cacna1hO88427 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Retrieved 100 of 76,532 protein–RNA pairs in 13.3 ms