Protein–RNA interactions for Protein: O88410

Cxcr3, C-X-C chemokine receptor type 3, mousemouse

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcr3O88410 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
Cxcr3O88410 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cxcr3O88410 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Cxcr3O88410 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cxcr3O88410 Rfng-201ENSMUST00000026156 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cxcr3O88410 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC21.12■□□□□ 0.97
Cxcr3O88410 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.12■□□□□ 0.97
Cxcr3O88410 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cxcr3O88410 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Klf2-201ENSMUST00000067912 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Klc1-201ENSMUST00000084941 2504 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Cxcr3O88410 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcr3O88410 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC21.11■□□□□ 0.97
Cxcr3O88410 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC21.11■□□□□ 0.97
Cxcr3O88410 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cxcr3O88410 Grm2-203ENSMUST00000201681 2111 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Ppp5c-201ENSMUST00000003183 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 AC116713.1-201ENSMUST00000215074 430 ntBASIC21.1■□□□□ 0.97
Cxcr3O88410 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Oser1-201ENSMUST00000046908 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Gm20387-201ENSMUST00000173609 1783 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cxcr3O88410 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcr3O88410 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcr3O88410 Gm18190-203ENSMUST00000209944 389 ntTSL 2 BASIC21.09■□□□□ 0.97
Cxcr3O88410 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC21.09■□□□□ 0.97
Cxcr3O88410 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcr3O88410 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcr3O88410 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcr3O88410 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cxcr3O88410 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC21.08■□□□□ 0.97
Cxcr3O88410 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cxcr3O88410 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.96
Cxcr3O88410 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cxcr3O88410 E130307A14Rik-201ENSMUST00000129191 2011 ntTSL 3 BASIC21.07■□□□□ 0.96
Cxcr3O88410 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Gm10399-202ENSMUST00000202768 748 ntBASIC21.07■□□□□ 0.96
Cxcr3O88410 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Slc35e2-203ENSMUST00000118607 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC21.07■□□□□ 0.96
Cxcr3O88410 Hyal2-201ENSMUST00000010191 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cxcr3O88410 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
Cxcr3O88410 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcr3O88410 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cxcr3O88410 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.06■□□□□ 0.96
Cxcr3O88410 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcr3O88410 Gm5131-201ENSMUST00000212776 1238 ntBASIC21.05■□□□□ 0.96
Cxcr3O88410 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcr3O88410 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC21.05■□□□□ 0.96
Cxcr3O88410 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cxcr3O88410 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
Cxcr3O88410 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cxcr3O88410 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Cxcr3O88410 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC21.04■□□□□ 0.96
Cxcr3O88410 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.04■□□□□ 0.96
Cxcr3O88410 Hagh-201ENSMUST00000024974 1101 ntAPPRIS ALT1 TSL 5 BASIC21.04■□□□□ 0.96
Cxcr3O88410 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Cxcr3O88410 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Cxcr3O88410 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cxcr3O88410 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcr3O88410 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Cxcr3O88410 Gm42418-201ENSMUST00000182010 1831 ntBASIC21.02■□□□□ 0.96
Cxcr3O88410 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cxcr3O88410 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC21.02■□□□□ 0.96
Cxcr3O88410 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcr3O88410 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC21.02■□□□□ 0.96
Cxcr3O88410 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcr3O88410 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
Cxcr3O88410 Syde2-201ENSMUST00000039517 5495 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cxcr3O88410 Gm10620-201ENSMUST00000098379 1332 ntBASIC21.02■□□□□ 0.95
Cxcr3O88410 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
Cxcr3O88410 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.01■□□□□ 0.95
Cxcr3O88410 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcr3O88410 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcr3O88410 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcr3O88410 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC21.01■□□□□ 0.95
Cxcr3O88410 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.01■□□□□ 0.95
Cxcr3O88410 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Cxcr3O88410 Txn2-204ENSMUST00000109748 2049 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcr3O88410 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21■□□□□ 0.95
Cxcr3O88410 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cxcr3O88410 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cxcr3O88410 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cxcr3O88410 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC21■□□□□ 0.95
Cxcr3O88410 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC21■□□□□ 0.95
Cxcr3O88410 Gm40881-201ENSMUST00000223397 166 ntBASIC21■□□□□ 0.95
Cxcr3O88410 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC21■□□□□ 0.95
Cxcr3O88410 Gm26766-202ENSMUST00000227544 2347 ntBASIC21■□□□□ 0.95
Cxcr3O88410 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
Cxcr3O88410 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cxcr3O88410 Prpsap2-201ENSMUST00000004955 1837 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms