Protein–RNA interactions for Protein: O88393

Tgfbr3, Transforming growth factor beta receptor type 3, mousemouse

Predictions only

Length 850 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tgfbr3O88393 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Hrh3-203ENSMUST00000164442 1242 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Tgfbr3O88393 Mettl9-201ENSMUST00000033163 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfbr3O88393 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfbr3O88393 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
Tgfbr3O88393 Gm9870-201ENSMUST00000063874 645 ntBASIC20.12■□□□□ 0.81
Tgfbr3O88393 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfbr3O88393 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfbr3O88393 Cep68-202ENSMUST00000109596 2171 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
Tgfbr3O88393 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
Tgfbr3O88393 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfbr3O88393 Josd2-211ENSMUST00000134398 563 ntTSL 5 BASIC20.1■□□□□ 0.81
Tgfbr3O88393 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC20.1■□□□□ 0.81
Tgfbr3O88393 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.1■□□□□ 0.81
Tgfbr3O88393 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfbr3O88393 Taf11-202ENSMUST00000114848 2207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfbr3O88393 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Tgfbr3O88393 Pnrc1-201ENSMUST00000049357 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfbr3O88393 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfbr3O88393 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
Tgfbr3O88393 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfbr3O88393 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfbr3O88393 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Tgfbr3O88393 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfbr3O88393 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Tgfbr3O88393 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfbr3O88393 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
Tgfbr3O88393 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfbr3O88393 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Tgfbr3O88393 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC20.08■□□□□ 0.8
Tgfbr3O88393 Cept1-203ENSMUST00000121231 2121 ntAPPRIS P3 TSL 5 BASIC20.08■□□□□ 0.8
Tgfbr3O88393 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Pkig-204ENSMUST00000126182 762 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Rab26-201ENSMUST00000035797 1575 ntAPPRIS P2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Tgfbr3O88393 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Tgfbr3O88393 Gm6139-201ENSMUST00000079261 882 ntBASIC20.06■□□□□ 0.8
Tgfbr3O88393 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfbr3O88393 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Tgfbr3O88393 Rcc1l-201ENSMUST00000076228 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfbr3O88393 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.05■□□□□ 0.8
Tgfbr3O88393 Gm26646-201ENSMUST00000180715 1490 ntTSL 5 BASIC20.05■□□□□ 0.8
Tgfbr3O88393 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfbr3O88393 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Tgfbr3O88393 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC20.05■□□□□ 0.8
Tgfbr3O88393 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Gm13448-201ENSMUST00000143469 1847 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Eva1b-201ENSMUST00000052876 1689 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Marc1-201ENSMUST00000048462 2039 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Flvcr1-202ENSMUST00000191946 1216 ntBASIC20.04■□□□□ 0.8
Tgfbr3O88393 Slc35b2-207ENSMUST00000226086 850 ntBASIC20.04■□□□□ 0.8
Tgfbr3O88393 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Tgfbr3O88393 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Gm43137-201ENSMUST00000198052 594 ntBASIC20.03■□□□□ 0.8
Tgfbr3O88393 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Gm2011-201ENSMUST00000203124 1263 ntBASIC20.03■□□□□ 0.8
Tgfbr3O88393 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Hnrnpab-202ENSMUST00000101249 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Tgfbr3O88393 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tgfbr3O88393 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC20.02■□□□□ 0.8
Tgfbr3O88393 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Tgfbr3O88393 Gm8495-201ENSMUST00000188740 694 ntBASIC20.02■□□□□ 0.8
Tgfbr3O88393 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Tgfbr3O88393 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC20.02■□□□□ 0.8
Tgfbr3O88393 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
Tgfbr3O88393 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
Tgfbr3O88393 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tgfbr3O88393 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
Tgfbr3O88393 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tgfbr3O88393 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Tgfbr3O88393 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC20.01■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms