Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Pdlim1O70400 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim1O70400 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim1O70400 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim1O70400 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim1O70400 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC20.83■□□□□ 0.93
Pdlim1O70400 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Pdlim1O70400 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC20.83■□□□□ 0.92
Pdlim1O70400 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim1O70400 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim1O70400 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim1O70400 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim1O70400 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim1O70400 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC20.82■□□□□ 0.92
Pdlim1O70400 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim1O70400 Foxj3-206ENSMUST00000138845 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim1O70400 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Pdlim1O70400 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Pdlim1O70400 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim1O70400 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim1O70400 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim1O70400 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim1O70400 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim1O70400 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
Pdlim1O70400 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC20.81■□□□□ 0.92
Pdlim1O70400 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Dleu2-209ENSMUST00000182957 352 ntTSL 2 BASIC20.8■□□□□ 0.92
Pdlim1O70400 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
Pdlim1O70400 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
Pdlim1O70400 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim1O70400 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim1O70400 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim1O70400 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Pdlim1O70400 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim1O70400 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pdlim1O70400 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.79■□□□□ 0.92
Pdlim1O70400 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Pdlim1O70400 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Pdlim1O70400 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Pdlim1O70400 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim1O70400 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim1O70400 AC164883.3-201ENSMUST00000227396 1774 ntBASIC20.78■□□□□ 0.92
Pdlim1O70400 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
Pdlim1O70400 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim1O70400 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim1O70400 Gm5131-201ENSMUST00000212776 1238 ntBASIC20.78■□□□□ 0.92
Pdlim1O70400 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Pdlim1O70400 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim1O70400 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC20.78■□□□□ 0.92
Pdlim1O70400 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Pdlim1O70400 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim1O70400 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim1O70400 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.77■□□□□ 0.92
Pdlim1O70400 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
Pdlim1O70400 Gm10620-201ENSMUST00000098379 1332 ntBASIC20.77■□□□□ 0.91
Pdlim1O70400 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim1O70400 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
Pdlim1O70400 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC20.76■□□□□ 0.91
Pdlim1O70400 Gm40881-201ENSMUST00000223397 166 ntBASIC20.76■□□□□ 0.91
Pdlim1O70400 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim1O70400 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim1O70400 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Pdlim1O70400 Hlx-201ENSMUST00000048572 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim1O70400 Ube2e3-202ENSMUST00000121433 1235 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pdlim1O70400 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim1O70400 Trir-201ENSMUST00000047281 902 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim1O70400 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim1O70400 Brf1-201ENSMUST00000011302 2615 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
Pdlim1O70400 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC20.75■□□□□ 0.91
Pdlim1O70400 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim1O70400 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Pdlim1O70400 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim1O70400 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pdlim1O70400 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim1O70400 Nnat-207ENSMUST00000173041 760 ntTSL 5 BASIC20.74■□□□□ 0.91
Pdlim1O70400 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Pdlim1O70400 Begain-203ENSMUST00000190647 2707 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim1O70400 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Pdlim1O70400 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC20.73■□□□□ 0.91
Pdlim1O70400 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Pdlim1O70400 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim1O70400 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim1O70400 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim1O70400 AC093043.1-201ENSMUST00000226700 898 ntBASIC20.72■□□□□ 0.91
Pdlim1O70400 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim1O70400 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim1O70400 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Pdlim1O70400 Gtf2e2-202ENSMUST00000170705 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 37.4 ms