Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Pdlim3O70209 Otud3-201ENSMUST00000097830 1668 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
Pdlim3O70209 Rgs6-202ENSMUST00000161801 2141 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Efcc1-201ENSMUST00000032132 2729 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
Pdlim3O70209 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Rnf166-201ENSMUST00000014614 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
Pdlim3O70209 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Fance-201ENSMUST00000088007 1581 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
Pdlim3O70209 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Ffar4-201ENSMUST00000067098 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Pdlim3O70209 Prdm11-205ENSMUST00000178666 1870 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdlim3O70209 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim3O70209 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim3O70209 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC19.03■□□□□ 0.64
Pdlim3O70209 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.03■□□□□ 0.64
Pdlim3O70209 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim3O70209 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim3O70209 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
Pdlim3O70209 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim3O70209 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Pdlim3O70209 4930500M09Rik-202ENSMUST00000194988 1563 ntBASIC19.02■□□□□ 0.64
Pdlim3O70209 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.02■□□□□ 0.64
Pdlim3O70209 Rab3ip-203ENSMUST00000219109 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim3O70209 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim3O70209 Gm5475-201ENSMUST00000132119 2608 ntAPPRIS P5 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim3O70209 Tusc3-201ENSMUST00000167992 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim3O70209 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Pdlim3O70209 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pdlim3O70209 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pdlim3O70209 Snrnp40-201ENSMUST00000105994 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Pdlim3O70209 AC164883.3-201ENSMUST00000227396 1774 ntBASIC19.01■□□□□ 0.63
Pdlim3O70209 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim3O70209 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
Pdlim3O70209 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Pdlim3O70209 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim3O70209 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Pdlim3O70209 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19■□□□□ 0.63
Pdlim3O70209 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Gm15893-201ENSMUST00000143208 1559 ntTSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Txnl4a-204ENSMUST00000145963 1756 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Pdlim3O70209 Socs2-201ENSMUST00000020215 2222 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Pdlim3O70209 Fbxw2-203ENSMUST00000113075 2260 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim3O70209 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC18.99■□□□□ 0.63
Pdlim3O70209 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC18.99■□□□□ 0.63
Pdlim3O70209 Clpp-201ENSMUST00000002735 1207 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim3O70209 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim3O70209 Ctsz-201ENSMUST00000016400 1441 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
Pdlim3O70209 B430319F04Rik-201ENSMUST00000209731 2669 ntBASIC18.98■□□□□ 0.63
Pdlim3O70209 Mpnd-204ENSMUST00000149441 1701 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim3O70209 Pdcd7-201ENSMUST00000048184 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim3O70209 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim3O70209 Scarna2-201ENSMUST00000157560 414 ntBASIC18.98■□□□□ 0.63
Pdlim3O70209 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim3O70209 Gm16437-201ENSMUST00000025669 507 ntBASIC18.98■□□□□ 0.63
Pdlim3O70209 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
Pdlim3O70209 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim3O70209 Spata2-202ENSMUST00000109211 1531 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim3O70209 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC18.97■□□□□ 0.63
Pdlim3O70209 Gm9806-201ENSMUST00000051080 552 ntBASIC18.97■□□□□ 0.63
Pdlim3O70209 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
Pdlim3O70209 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
Pdlim3O70209 Tmub1-202ENSMUST00000115033 1598 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
Pdlim3O70209 Slc12a8-204ENSMUST00000121925 2656 ntAPPRIS P2 TSL 5 BASIC18.97■□□□□ 0.63
Pdlim3O70209 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim3O70209 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim3O70209 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim3O70209 Retreg2-201ENSMUST00000097694 2561 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim3O70209 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim3O70209 Gm9934-201ENSMUST00000098303 2077 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
Pdlim3O70209 Ccnd3-201ENSMUST00000037333 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim3O70209 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim3O70209 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim3O70209 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC18.95■□□□□ 0.62
Pdlim3O70209 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim3O70209 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
Pdlim3O70209 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 Sox2-201ENSMUST00000099151 2057 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
Pdlim3O70209 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 Dennd6a-202ENSMUST00000203874 2677 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC18.94■□□□□ 0.62
Pdlim3O70209 Dpf1-201ENSMUST00000049977 2309 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Pdlim3O70209 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim3O70209 Lyar-201ENSMUST00000087514 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim3O70209 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim3O70209 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC18.93■□□□□ 0.62
Pdlim3O70209 Mrpl48-207ENSMUST00000146003 1625 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
Pdlim3O70209 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
Pdlim3O70209 Gm44949-201ENSMUST00000206423 1450 ntBASIC18.93■□□□□ 0.62
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms