Protein–RNA interactions for Protein: O55017

Cacna1b, Voltage-dependent N-type calcium channel subunit alpha-1B, mousemouse

Predictions only

Length 2,327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1bO55017 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Cacna1bO55017 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1bO55017 Tmed10-201ENSMUST00000040766 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1bO55017 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1bO55017 Gm3448-202ENSMUST00000097400 747 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Cacna1bO55017 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1bO55017 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1bO55017 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Cacna1bO55017 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Cacna1bO55017 Tarbp2-202ENSMUST00000100168 1278 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Cacna1bO55017 Gm15867-201ENSMUST00000159407 388 ntTSL 1 (best) BASIC20.45■□□□□ 0.87
Cacna1bO55017 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.45■□□□□ 0.87
Cacna1bO55017 Mecp2-201ENSMUST00000033770 1739 ntAPPRIS P4 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1bO55017 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Cacna1bO55017 Gm26571-201ENSMUST00000181399 666 ntBASIC20.44■□□□□ 0.86
Cacna1bO55017 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC20.44■□□□□ 0.86
Cacna1bO55017 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1bO55017 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1bO55017 Htra1-201ENSMUST00000006367 2041 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1bO55017 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1bO55017 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Cacna1bO55017 Ubtd1-201ENSMUST00000026170 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1bO55017 AC158990.1-201ENSMUST00000221450 2016 ntBASIC20.43■□□□□ 0.86
Cacna1bO55017 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
Cacna1bO55017 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC20.43■□□□□ 0.86
Cacna1bO55017 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1bO55017 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1bO55017 Gm9207-201ENSMUST00000198773 1115 ntBASIC20.43■□□□□ 0.86
Cacna1bO55017 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC20.43■□□□□ 0.86
Cacna1bO55017 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Cacna1bO55017 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Pink1-203ENSMUST00000105817 1711 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
Cacna1bO55017 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Rab40b-201ENSMUST00000106107 1861 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
Cacna1bO55017 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC20.42■□□□□ 0.86
Cacna1bO55017 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Gm27405-201ENSMUST00000184201 112 ntBASIC20.42■□□□□ 0.86
Cacna1bO55017 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Stmn4-204ENSMUST00000121955 1361 ntTSL 5 BASIC20.42■□□□□ 0.86
Cacna1bO55017 Gm9828-202ENSMUST00000126622 1446 ntTSL 3 BASIC20.42■□□□□ 0.86
Cacna1bO55017 Gm43173-201ENSMUST00000202246 593 ntBASIC20.42■□□□□ 0.86
Cacna1bO55017 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC20.42■□□□□ 0.86
Cacna1bO55017 Lipt2-201ENSMUST00000032967 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Cacna1bO55017 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1bO55017 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1bO55017 Gm13001-201ENSMUST00000154285 774 ntTSL 2 BASIC20.41■□□□□ 0.86
Cacna1bO55017 Dap-205ENSMUST00000186547 535 ntTSL 3 BASIC20.41■□□□□ 0.86
Cacna1bO55017 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC20.41■□□□□ 0.86
Cacna1bO55017 Rell2-201ENSMUST00000070709 1767 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Cacna1bO55017 Gm10849-201ENSMUST00000100397 618 ntBASIC20.41■□□□□ 0.86
Cacna1bO55017 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC20.41■□□□□ 0.86
Cacna1bO55017 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cacna1bO55017 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Cacna1bO55017 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
Cacna1bO55017 Gm8770-201ENSMUST00000121113 1109 ntBASIC20.4■□□□□ 0.86
Cacna1bO55017 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC20.4■□□□□ 0.86
Cacna1bO55017 Gm6934-201ENSMUST00000194780 1905 ntBASIC20.39■□□□□ 0.86
Cacna1bO55017 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1bO55017 Tmem9-202ENSMUST00000117950 847 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
Cacna1bO55017 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
Cacna1bO55017 Gm8493-201ENSMUST00000196881 489 ntBASIC20.39■□□□□ 0.86
Cacna1bO55017 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
Cacna1bO55017 Txnrd2-214ENSMUST00000205679 1866 ntTSL 5 BASIC20.39■□□□□ 0.86
Cacna1bO55017 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.39■□□□□ 0.86
Cacna1bO55017 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1bO55017 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1bO55017 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1bO55017 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1bO55017 Gm5577-201ENSMUST00000134600 1434 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
Cacna1bO55017 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Cacna1bO55017 H2-Q7-204ENSMUST00000116598 1134 ntTSL 5 BASIC20.38■□□□□ 0.85
Cacna1bO55017 Krt8-ps-201ENSMUST00000208495 945 ntBASIC20.38■□□□□ 0.85
Cacna1bO55017 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
Cacna1bO55017 AC153890.1-201ENSMUST00000220021 2469 ntBASIC20.37■□□□□ 0.85
Cacna1bO55017 Tsc22d1-203ENSMUST00000101618 1043 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1bO55017 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1bO55017 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Cacna1bO55017 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1bO55017 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
Cacna1bO55017 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC20.37■□□□□ 0.85
Cacna1bO55017 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cacna1bO55017 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1bO55017 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1bO55017 Gm43017-201ENSMUST00000198296 752 ntBASIC20.36■□□□□ 0.85
Cacna1bO55017 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC20.36■□□□□ 0.85
Cacna1bO55017 Nrbp2-208ENSMUST00000228366 1863 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Cacna1bO55017 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC20.36■□□□□ 0.85
Cacna1bO55017 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC20.36■□□□□ 0.85
Cacna1bO55017 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Cacna1bO55017 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
Cacna1bO55017 Pithd1-201ENSMUST00000105851 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1bO55017 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Cacna1bO55017 4933431K14Rik-201ENSMUST00000195799 1352 ntBASIC20.35■□□□□ 0.85
Cacna1bO55017 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms