Protein–RNA interactions for Protein: O54991

Cntnap1, Contactin-associated protein 1, mousemouse

Predictions only

Length 1,385 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntnap1O54991 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC28.27■■■□□ 2.12
Cntnap1O54991 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cntnap1O54991 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
Cntnap1O54991 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC28.27■■■□□ 2.12
Cntnap1O54991 Porcn-203ENSMUST00000089402 1839 ntAPPRIS ALT1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cntnap1O54991 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC28.27■■■□□ 2.12
Cntnap1O54991 Emid1-208ENSMUST00000163299 1923 ntAPPRIS ALT2 TSL 5 BASIC28.26■■■□□ 2.12
Cntnap1O54991 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC28.26■■■□□ 2.12
Cntnap1O54991 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC28.26■■■□□ 2.12
Cntnap1O54991 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC28.26■■■□□ 2.12
Cntnap1O54991 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
Cntnap1O54991 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Cntnap1O54991 Gm22325-201ENSMUST00000158904 308 ntBASIC28.25■■■□□ 2.11
Cntnap1O54991 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC28.25■■■□□ 2.11
Cntnap1O54991 Gm10033-202ENSMUST00000211874 928 ntBASIC28.25■■■□□ 2.11
Cntnap1O54991 Slc36a4-202ENSMUST00000115588 1745 ntAPPRIS ALT2 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cntnap1O54991 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC28.25■■■□□ 2.11
Cntnap1O54991 Dnajb2-207ENSMUST00000188290 1855 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cntnap1O54991 Timmdc1-201ENSMUST00000002925 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cntnap1O54991 Ppa1-201ENSMUST00000020286 1364 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cntnap1O54991 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cntnap1O54991 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cntnap1O54991 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cntnap1O54991 D830025C05Rik-201ENSMUST00000059474 976 ntBASIC28.24■■■□□ 2.11
Cntnap1O54991 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Gm8770-201ENSMUST00000121113 1109 ntBASIC28.24■■■□□ 2.11
Cntnap1O54991 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
Cntnap1O54991 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC28.24■■■□□ 2.11
Cntnap1O54991 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
Cntnap1O54991 Htr7-201ENSMUST00000099505 1606 ntTSL 5 BASIC28.23■■■□□ 2.11
Cntnap1O54991 Aktip-205ENSMUST00000125257 2079 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
Cntnap1O54991 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Cntnap1O54991 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
Cntnap1O54991 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC28.23■■■□□ 2.11
Cntnap1O54991 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
Cntnap1O54991 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC28.22■■■□□ 2.11
Cntnap1O54991 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.21■■■□□ 2.11
Cntnap1O54991 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Cntnap1O54991 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC28.21■■■□□ 2.11
Cntnap1O54991 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC28.2■■■□□ 2.11
Cntnap1O54991 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cntnap1O54991 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
Cntnap1O54991 AV356131-201ENSMUST00000206201 750 ntBASIC28.2■■■□□ 2.1
Cntnap1O54991 Gm18671-201ENSMUST00000214826 683 ntBASIC28.2■■■□□ 2.1
Cntnap1O54991 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cntnap1O54991 Gm3558-201ENSMUST00000163790 2055 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cntnap1O54991 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC28.2■■■□□ 2.1
Cntnap1O54991 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cntnap1O54991 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
Cntnap1O54991 Tfg-202ENSMUST00000121554 716 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
Cntnap1O54991 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cntnap1O54991 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cntnap1O54991 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cntnap1O54991 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC28.16■■■□□ 2.1
Cntnap1O54991 Nespas-201ENSMUST00000143738 1083 ntBASIC28.16■■■□□ 2.1
Cntnap1O54991 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cntnap1O54991 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cntnap1O54991 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
Cntnap1O54991 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Cntnap1O54991 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cntnap1O54991 Gm6085-201ENSMUST00000182774 1470 ntBASIC28.15■■■□□ 2.1
Cntnap1O54991 Creb1-204ENSMUST00000185594 1569 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Cntnap1O54991 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC28.15■■■□□ 2.1
Cntnap1O54991 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC28.14■■■□□ 2.1
Cntnap1O54991 Gm10602-201ENSMUST00000098239 609 ntBASIC28.14■■■□□ 2.1
Cntnap1O54991 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Cntnap1O54991 AC153504.1-201ENSMUST00000218379 2290 ntBASIC28.14■■■□□ 2.09
Cntnap1O54991 BC022687-201ENSMUST00000037014 1960 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
Cntnap1O54991 Cirbp-202ENSMUST00000105365 1321 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Cntnap1O54991 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC28.13■■■□□ 2.09
Cntnap1O54991 Gm10657-201ENSMUST00000193528 1031 ntBASIC28.12■■■□□ 2.09
Cntnap1O54991 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC28.12■■■□□ 2.09
Cntnap1O54991 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC28.12■■■□□ 2.09
Cntnap1O54991 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Cntnap1O54991 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC28.11■■■□□ 2.09
Cntnap1O54991 Gm40848-201ENSMUST00000221998 324 ntBASIC28.11■■■□□ 2.09
Cntnap1O54991 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC28.11■■■□□ 2.09
Cntnap1O54991 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC28.11■■■□□ 2.09
Cntnap1O54991 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC28.1■■■□□ 2.09
Cntnap1O54991 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Cntnap1O54991 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Cntnap1O54991 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC28.1■■■□□ 2.09
Cntnap1O54991 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cntnap1O54991 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC28.09■■■□□ 2.09
Cntnap1O54991 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Cntnap1O54991 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC28.09■■■□□ 2.09
Cntnap1O54991 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC28.09■■■□□ 2.09
Cntnap1O54991 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cntnap1O54991 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cntnap1O54991 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC28.08■■■□□ 2.09
Cntnap1O54991 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cntnap1O54991 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
Cntnap1O54991 Sccpdh-201ENSMUST00000040538 1948 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms