Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Nr1i3O35627 Frat1-201ENSMUST00000087155 2614 ntAPPRIS P1 BASIC22.69■■□□□ 1.22
Nr1i3O35627 Faap24-201ENSMUST00000032704 1857 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 8430422M14Rik-201ENSMUST00000199608 822 ntBASIC22.68■■□□□ 1.22
Nr1i3O35627 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
Nr1i3O35627 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Nr1i3O35627 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC22.68■■□□□ 1.22
Nr1i3O35627 AC158990.1-201ENSMUST00000221450 2016 ntBASIC22.67■■□□□ 1.22
Nr1i3O35627 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nr1i3O35627 Nt5m-201ENSMUST00000102695 1306 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nr1i3O35627 Gm16286-205ENSMUST00000127234 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nr1i3O35627 Prdm13-202ENSMUST00000095141 3173 ntAPPRIS P2 TSL 2 BASIC22.67■■□□□ 1.22
Nr1i3O35627 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nr1i3O35627 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Nr1i3O35627 Kif1bp-202ENSMUST00000159704 2622 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Nr1i3O35627 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC22.66■■□□□ 1.22
Nr1i3O35627 Gfi1-202ENSMUST00000065478 2639 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nr1i3O35627 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Nr1i3O35627 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nr1i3O35627 Sds-204ENSMUST00000201684 1288 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
Nr1i3O35627 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
Nr1i3O35627 Bsg-201ENSMUST00000067036 1526 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nr1i3O35627 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Nr1i3O35627 Irf2bp1-201ENSMUST00000053713 2734 ntAPPRIS P1 BASIC22.64■■□□□ 1.22
Nr1i3O35627 Pi4kb-207ENSMUST00000167008 1962 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Nr1i3O35627 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nr1i3O35627 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Nr1i3O35627 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC22.64■■□□□ 1.21
Nr1i3O35627 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Nr1i3O35627 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nr1i3O35627 Gm5602-201ENSMUST00000146366 1763 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Nr1i3O35627 Rasgrf2-206ENSMUST00000216219 2115 ntTSL 5 BASIC22.63■■□□□ 1.21
Nr1i3O35627 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nr1i3O35627 9230116N13Rik-201ENSMUST00000181746 2097 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
Nr1i3O35627 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Nr1i3O35627 Gm5913-201ENSMUST00000119397 1399 ntBASIC22.63■■□□□ 1.21
Nr1i3O35627 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Spata6-213ENSMUST00000153746 1444 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Fbxw2-201ENSMUST00000028220 2030 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Nr1i3O35627 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Nr1i3O35627 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Nr1i3O35627 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nr1i3O35627 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Nr1i3O35627 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nr1i3O35627 Rbfox3-204ENSMUST00000106278 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC22.61■■□□□ 1.21
Nr1i3O35627 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Nr1i3O35627 E530011L22Rik-202ENSMUST00000216791 2007 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Nr1i3O35627 1700001C19Rik-201ENSMUST00000061885 1622 ntAPPRIS P3 TSL 1 (best) BASIC22.6■■□□□ 1.21
Nr1i3O35627 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nr1i3O35627 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Nr1i3O35627 9130213A22Rik-201ENSMUST00000180487 1581 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nr1i3O35627 Adad2-201ENSMUST00000098361 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nr1i3O35627 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
Nr1i3O35627 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Nr1i3O35627 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC22.58■■□□□ 1.21
Nr1i3O35627 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nr1i3O35627 Rab42-201ENSMUST00000040411 761 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nr1i3O35627 Shisa8-201ENSMUST00000179269 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Nr1i3O35627 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nr1i3O35627 Gsr-201ENSMUST00000033992 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nr1i3O35627 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.2
Nr1i3O35627 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Nr1i3O35627 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nr1i3O35627 Abhd11-201ENSMUST00000046999 1493 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nr1i3O35627 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC22.57■■□□□ 1.2
Nr1i3O35627 Ccr10-201ENSMUST00000062759 1726 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nr1i3O35627 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Nr1i3O35627 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC22.56■■□□□ 1.2
Nr1i3O35627 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC22.56■■□□□ 1.2
Nr1i3O35627 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC22.56■■□□□ 1.2
Nr1i3O35627 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC22.56■■□□□ 1.2
Nr1i3O35627 Rpf2-201ENSMUST00000045114 1853 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Nr1i3O35627 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nr1i3O35627 Uap1-201ENSMUST00000027981 2283 ntAPPRIS P3 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nr1i3O35627 Setd6-201ENSMUST00000034096 1707 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nr1i3O35627 Fam168b-204ENSMUST00000170092 941 ntTSL 5 BASIC22.55■■□□□ 1.2
Nr1i3O35627 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nr1i3O35627 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nr1i3O35627 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Nr1i3O35627 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nr1i3O35627 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Nr1i3O35627 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Nr1i3O35627 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC22.54■■□□□ 1.2
Nr1i3O35627 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC22.54■■□□□ 1.2
Nr1i3O35627 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nr1i3O35627 Shisa6-201ENSMUST00000066679 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nr1i3O35627 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC22.54■■□□□ 1.2
Nr1i3O35627 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC22.53■■□□□ 1.2
Nr1i3O35627 Noc2l-202ENSMUST00000179886 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.53■■□□□ 1.2
Nr1i3O35627 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.53■■□□□ 1.2
Nr1i3O35627 Gm11847-201ENSMUST00000125165 1119 ntBASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 12.3 ms