Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC19.89■□□□□ 0.77
Clk3O35492 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Clk3O35492 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk3O35492 Stx3-202ENSMUST00000069285 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clk3O35492 Dvl3-201ENSMUST00000003318 2498 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 4933408J17Rik-201ENSMUST00000181835 1859 ntTSL 2 BASIC19.88■□□□□ 0.77
Clk3O35492 Gm9833-201ENSMUST00000061419 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Pawr-201ENSMUST00000095313 1745 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Apaf1-205ENSMUST00000160788 1596 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Ttc6-201ENSMUST00000101398 1484 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clk3O35492 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC19.88■□□□□ 0.77
Clk3O35492 Ccnh-201ENSMUST00000022030 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk3O35492 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk3O35492 Spsb3-209ENSMUST00000168265 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk3O35492 Dgcr6-207ENSMUST00000151266 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk3O35492 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.87■□□□□ 0.77
Clk3O35492 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk3O35492 Ints11-201ENSMUST00000030901 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clk3O35492 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC19.87■□□□□ 0.77
Clk3O35492 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Clk3O35492 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC19.86■□□□□ 0.77
Clk3O35492 Ndfip1-201ENSMUST00000025293 930 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk3O35492 Chadl-201ENSMUST00000072910 2548 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Clk3O35492 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk3O35492 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Clk3O35492 Ezh2-201ENSMUST00000081721 2787 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk3O35492 Tifa-202ENSMUST00000163775 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk3O35492 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clk3O35492 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk3O35492 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Clk3O35492 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC19.85■□□□□ 0.77
Clk3O35492 Chn2-201ENSMUST00000046856 2418 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk3O35492 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
Clk3O35492 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
Clk3O35492 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Polr2m-201ENSMUST00000034720 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Tmem230-201ENSMUST00000028816 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Gadd45g-201ENSMUST00000021903 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Slc35b2-205ENSMUST00000224905 1906 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Clk3O35492 Gm16286-201ENSMUST00000025463 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Gprc5b-204ENSMUST00000208394 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Tcte2-202ENSMUST00000127032 1875 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Clk3O35492 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Clk3O35492 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Clk3O35492 Tmem164-205ENSMUST00000112891 1654 ntTSL 5 BASIC19.83■□□□□ 0.76
Clk3O35492 Lsr-203ENSMUST00000108116 2071 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk3O35492 AC117245.4-201ENSMUST00000217388 1646 ntBASIC19.83■□□□□ 0.76
Clk3O35492 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk3O35492 Tinagl1-203ENSMUST00000105999 1952 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk3O35492 Best2-201ENSMUST00000059072 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk3O35492 Eva1b-203ENSMUST00000106152 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Clk3O35492 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Gm42418-201ENSMUST00000182010 1831 ntBASIC19.82■□□□□ 0.76
Clk3O35492 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Git2-214ENSMUST00000155908 2338 ntTSL 5 BASIC19.82■□□□□ 0.76
Clk3O35492 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Slc9a3r2-201ENSMUST00000002572 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Clk3O35492 Akt1s1-201ENSMUST00000054343 1592 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Btbd6-201ENSMUST00000002880 2057 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Clk3O35492 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Clk3O35492 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clk3O35492 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Clk3O35492 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk3O35492 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk3O35492 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.81■□□□□ 0.76
Clk3O35492 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Clk3O35492 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Clk3O35492 Rell2-211ENSMUST00000176902 1835 ntTSL 5 BASIC19.81■□□□□ 0.76
Clk3O35492 Kcng2-201ENSMUST00000077962 2813 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clk3O35492 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Clk3O35492 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk3O35492 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Clk3O35492 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC19.79■□□□□ 0.76
Clk3O35492 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Dbp-203ENSMUST00000211357 1252 ntTSL 5 BASIC19.79■□□□□ 0.76
Clk3O35492 Rbfa-201ENSMUST00000025462 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Fam241b-203ENSMUST00000124615 1493 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Clk3O35492 Fkbp8-201ENSMUST00000075491 1698 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk3O35492 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk3O35492 4930526A20Rik-202ENSMUST00000142461 1628 ntBASIC19.78■□□□□ 0.76
Clk3O35492 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
Clk3O35492 Gm15334-201ENSMUST00000131421 325 ntTSL 3 BASIC19.78■□□□□ 0.76
Clk3O35492 Msto1-201ENSMUST00000107494 2093 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clk3O35492 Tmem164-204ENSMUST00000112889 1742 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Clk3O35492 Tmem70-201ENSMUST00000065373 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Clk3O35492 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 15.8 ms