Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Cblc-202ENSMUST00000108449 1514 ntTSL 1 (best) BASIC27.54■■■□□ 2
Col15a1O35206 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC27.53■■■□□ 2
Col15a1O35206 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC27.53■■■□□ 2
Col15a1O35206 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC27.53■■■□□ 2
Col15a1O35206 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Col15a1O35206 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col15a1O35206 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC27.52■■■□□ 2
Col15a1O35206 Krt8-ps-201ENSMUST00000208495 945 ntBASIC27.52■■■□□ 2
Col15a1O35206 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC27.52■■■□□ 2
Col15a1O35206 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col15a1O35206 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC27.52■■■□□ 2
Col15a1O35206 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■■□□ 2
Col15a1O35206 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col15a1O35206 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col15a1O35206 Krtap5-5-201ENSMUST00000097942 1177 ntAPPRIS P1 BASIC27.51■■□□□ 1.99
Col15a1O35206 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col15a1O35206 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC27.51■■□□□ 1.99
Col15a1O35206 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC27.51■■□□□ 1.99
Col15a1O35206 2310015A10Rik-201ENSMUST00000180643 1399 ntTSL 1 (best) BASIC27.51■■□□□ 1.99
Col15a1O35206 BC004004-202ENSMUST00000120346 1297 ntAPPRIS P1 TSL 5 BASIC27.5■■□□□ 1.99
Col15a1O35206 Gm3448-203ENSMUST00000179539 787 ntAPPRIS ALT2 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col15a1O35206 Gm3448-201ENSMUST00000097399 787 ntAPPRIS P5 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col15a1O35206 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC27.5■■□□□ 1.99
Col15a1O35206 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Col15a1O35206 Gm8495-201ENSMUST00000188740 694 ntBASIC27.49■■□□□ 1.99
Col15a1O35206 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col15a1O35206 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Col15a1O35206 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC27.49■■□□□ 1.99
Col15a1O35206 Gm18284-201ENSMUST00000172604 624 ntBASIC27.48■■□□□ 1.99
Col15a1O35206 4930535I16Rik-201ENSMUST00000181410 519 ntAPPRIS P1 BASIC27.48■■□□□ 1.99
Col15a1O35206 Gm43137-201ENSMUST00000198052 594 ntBASIC27.48■■□□□ 1.99
Col15a1O35206 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC27.48■■□□□ 1.99
Col15a1O35206 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC27.48■■□□□ 1.99
Col15a1O35206 Ppp2r2c-203ENSMUST00000201156 461 ntTSL 5 BASIC27.48■■□□□ 1.99
Col15a1O35206 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC27.47■■□□□ 1.99
Col15a1O35206 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col15a1O35206 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col15a1O35206 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC27.47■■□□□ 1.99
Col15a1O35206 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col15a1O35206 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC27.47■■□□□ 1.99
Col15a1O35206 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Col15a1O35206 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC27.46■■□□□ 1.99
Col15a1O35206 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC27.46■■□□□ 1.99
Col15a1O35206 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC27.46■■□□□ 1.99
Col15a1O35206 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col15a1O35206 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col15a1O35206 1700056E22Rik-201ENSMUST00000050306 967 ntAPPRIS P1 BASIC27.46■■□□□ 1.99
Col15a1O35206 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col15a1O35206 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC27.46■■□□□ 1.99
Col15a1O35206 Cdkn2aipnl-201ENSMUST00000102763 1832 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col15a1O35206 Mapk12-201ENSMUST00000088827 1889 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col15a1O35206 Pwwp2b-202ENSMUST00000172136 2543 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.99
Col15a1O35206 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Col15a1O35206 Akt1s1-203ENSMUST00000107882 1160 ntAPPRIS ALT2 TSL 3 BASIC27.45■■□□□ 1.98
Col15a1O35206 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC27.45■■□□□ 1.98
Col15a1O35206 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC27.45■■□□□ 1.98
Col15a1O35206 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Col15a1O35206 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC27.45■■□□□ 1.98
Col15a1O35206 St3gal5-202ENSMUST00000114112 2439 ntAPPRIS ALT2 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col15a1O35206 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col15a1O35206 Gm29394-204ENSMUST00000177504 448 ntAPPRIS ALT2 TSL 3 BASIC27.44■■□□□ 1.98
Col15a1O35206 Cuta-201ENSMUST00000025027 639 ntAPPRIS P3 TSL 1 (best) BASIC27.44■■□□□ 1.98
Col15a1O35206 Tinagl1-209ENSMUST00000175992 1847 ntAPPRIS ALT2 TSL 5 BASIC27.44■■□□□ 1.98
Col15a1O35206 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Col15a1O35206 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC27.43■■□□□ 1.98
Col15a1O35206 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC27.43■■□□□ 1.98
Col15a1O35206 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col15a1O35206 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col15a1O35206 Arhgap27os2-201ENSMUST00000123812 1390 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Col15a1O35206 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC27.42■■□□□ 1.98
Col15a1O35206 Sumo2-205ENSMUST00000121185 911 ntTSL 3 BASIC27.42■■□□□ 1.98
Col15a1O35206 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC27.42■■□□□ 1.98
Col15a1O35206 Eri3-201ENSMUST00000037127 1719 ntAPPRIS P1 TSL 1 (best) BASIC27.42■■□□□ 1.98
Col15a1O35206 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Col15a1O35206 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC27.41■■□□□ 1.98
Col15a1O35206 Paip2-204ENSMUST00000115736 857 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
Col15a1O35206 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC27.41■■□□□ 1.98
Col15a1O35206 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC27.41■■□□□ 1.98
Col15a1O35206 Flvcr1-202ENSMUST00000191946 1216 ntBASIC27.41■■□□□ 1.98
Col15a1O35206 Gm10657-201ENSMUST00000193528 1031 ntBASIC27.41■■□□□ 1.98
Col15a1O35206 Stub1-201ENSMUST00000044911 1672 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
Col15a1O35206 Kdm3b-204ENSMUST00000224715 2032 ntBASIC27.41■■□□□ 1.98
Col15a1O35206 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Col15a1O35206 Ankrd9-207ENSMUST00000148765 1431 ntAPPRIS P2 TSL 2 BASIC27.4■■□□□ 1.98
Col15a1O35206 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC27.4■■□□□ 1.98
Col15a1O35206 Art1-201ENSMUST00000033300 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Col15a1O35206 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC27.39■■□□□ 1.98
Col15a1O35206 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
Col15a1O35206 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.98
Col15a1O35206 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC27.39■■□□□ 1.98
Col15a1O35206 Amh-201ENSMUST00000036016 1670 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
Col15a1O35206 Cdkn2a-202ENSMUST00000107131 895 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
Col15a1O35206 4930444P10Rik-202ENSMUST00000145070 1844 ntAPPRIS P2 TSL 2 BASIC27.38■■□□□ 1.97
Col15a1O35206 4930507D05Rik-201ENSMUST00000181110 1834 ntAPPRIS P1 BASIC27.38■■□□□ 1.97
Col15a1O35206 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Col15a1O35206 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC27.37■■□□□ 1.97
Col15a1O35206 Gng5-203ENSMUST00000119130 593 ntTSL 2 BASIC27.37■■□□□ 1.97
Col15a1O35206 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Col15a1O35206 Mir7075-201ENSMUST00000184187 82 ntBASIC27.37■■□□□ 1.97
Col15a1O35206 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
Retrieved 100 of 76,532 protein–RNA pairs in 14 ms