Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC19.7■□□□□ 0.74
Cx3cl1O35188 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cl1O35188 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cl1O35188 Eef1a2-201ENSMUST00000055990 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Cx3cl1O35188 Auh-204ENSMUST00000120535 1647 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cl1O35188 Gnl1-201ENSMUST00000087200 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cl1O35188 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC19.69■□□□□ 0.74
Cx3cl1O35188 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Cx3cl1O35188 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Mageb3-201ENSMUST00000104936 2341 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cl1O35188 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC19.68■□□□□ 0.74
Cx3cl1O35188 Eif2b3-203ENSMUST00000106448 1555 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Cx3cl1O35188 Ccdc88a-202ENSMUST00000109477 1716 ntTSL 2 BASIC19.68■□□□□ 0.74
Cx3cl1O35188 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Rmdn2-208ENSMUST00000225357 2118 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Tmem120b-201ENSMUST00000067505 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Rbm34-203ENSMUST00000212618 1509 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Btbd19-209ENSMUST00000183310 1620 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC19.67■□□□□ 0.74
Cx3cl1O35188 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Hs6st3-201ENSMUST00000065904 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Txnrd2-213ENSMUST00000178093 1785 ntTSL 5 BASIC19.67■□□□□ 0.74
Cx3cl1O35188 Ntsr2-201ENSMUST00000111064 1524 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cl1O35188 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
Cx3cl1O35188 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cl1O35188 AC153962.1-201ENSMUST00000218530 1948 ntBASIC19.66■□□□□ 0.74
Cx3cl1O35188 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cl1O35188 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Cx3cl1O35188 Ndufs2-201ENSMUST00000013737 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC19.65■□□□□ 0.74
Cx3cl1O35188 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Kti12-201ENSMUST00000102738 1629 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.65■□□□□ 0.74
Cx3cl1O35188 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Bex1-201ENSMUST00000058125 866 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Rabac1-201ENSMUST00000076961 899 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cl1O35188 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Hmg20b-203ENSMUST00000105324 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Ankrd13c-202ENSMUST00000164582 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
Cx3cl1O35188 Nrxn1-213ENSMUST00000172466 2477 ntTSL 5 BASIC19.63■□□□□ 0.73
Cx3cl1O35188 Bean1-202ENSMUST00000164076 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cl1O35188 Mbp-208ENSMUST00000114676 1685 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cl1O35188 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Cx3cl1O35188 Zfp629-208ENSMUST00000151107 583 ntTSL 3 BASIC19.63■□□□□ 0.73
Cx3cl1O35188 AC116713.1-201ENSMUST00000215074 430 ntBASIC19.63■□□□□ 0.73
Cx3cl1O35188 AC093043.1-201ENSMUST00000226700 898 ntBASIC19.63■□□□□ 0.73
Cx3cl1O35188 Ggnbp2-202ENSMUST00000100686 2275 ntTSL 5 BASIC19.63■□□□□ 0.73
Cx3cl1O35188 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cx3cl1O35188 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cx3cl1O35188 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC19.62■□□□□ 0.73
Cx3cl1O35188 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Cx3cl1O35188 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cl1O35188 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
Cx3cl1O35188 AC158990.1-201ENSMUST00000221450 2016 ntBASIC19.61■□□□□ 0.73
Cx3cl1O35188 Psip1-202ENSMUST00000107214 1973 ntTSL 5 BASIC19.61■□□□□ 0.73
Cx3cl1O35188 A830035O19Rik-201ENSMUST00000216147 1898 ntBASIC19.61■□□□□ 0.73
Cx3cl1O35188 Pstpip1-201ENSMUST00000059206 1863 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cl1O35188 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC19.61■□□□□ 0.73
Cx3cl1O35188 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC19.61■□□□□ 0.73
Cx3cl1O35188 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cl1O35188 Adssl1-201ENSMUST00000021726 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cl1O35188 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Cx3cl1O35188 Gm45869-201ENSMUST00000210335 1704 ntTSL 5 BASIC19.61■□□□□ 0.73
Cx3cl1O35188 Prpsap2-204ENSMUST00000168115 1771 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Dcun1d5-202ENSMUST00000215683 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Fam118b-201ENSMUST00000059057 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Pus1-202ENSMUST00000031483 1814 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
Cx3cl1O35188 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms