Protein–RNA interactions for Protein: O08665

Sema3a, Semaphorin-3A, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sema3aO08665 Gm37415-201ENSMUST00000192265 2054 ntBASIC21.34■■□□□ 1.01
Sema3aO08665 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.34■■□□□ 1.01
Sema3aO08665 Nfkbil1-201ENSMUST00000048994 1447 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
Sema3aO08665 Acss2-203ENSMUST00000103142 2145 ntTSL 5 BASIC21.33■■□□□ 1.01
Sema3aO08665 Gm10232-201ENSMUST00000089221 720 ntBASIC21.33■■□□□ 1.01
Sema3aO08665 Tex30-208ENSMUST00000147571 1360 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1
Sema3aO08665 Homer2-201ENSMUST00000026922 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
Sema3aO08665 Mad2l2-201ENSMUST00000030860 1535 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema3aO08665 AC158990.1-201ENSMUST00000221450 2016 ntBASIC21.32■■□□□ 1
Sema3aO08665 Tmem74b-202ENSMUST00000109872 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Sema3aO08665 Csnk1a1-201ENSMUST00000115246 1484 ntTSL 5 BASIC21.32■■□□□ 1
Sema3aO08665 Kcnip1-203ENSMUST00000109340 1840 ntTSL 1 (best) BASIC21.32■■□□□ 1
Sema3aO08665 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
Sema3aO08665 Gm5812-201ENSMUST00000061073 957 ntBASIC21.31■■□□□ 1
Sema3aO08665 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema3aO08665 Aurkb-202ENSMUST00000108666 1831 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Sema3aO08665 Gm32051-202ENSMUST00000197905 2385 ntBASIC21.31■■□□□ 1
Sema3aO08665 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Sema3aO08665 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC21.31■■□□□ 1
Sema3aO08665 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
Sema3aO08665 Wnt5b-204ENSMUST00000178696 2371 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema3aO08665 Gm9767-201ENSMUST00000041011 1193 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sema3aO08665 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC21.3■■□□□ 1
Sema3aO08665 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema3aO08665 Fam189a2-201ENSMUST00000096164 2547 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sema3aO08665 Ccdc92-201ENSMUST00000036206 2473 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Sema3aO08665 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.3■■□□□ 1
Sema3aO08665 Mrgbp-201ENSMUST00000029085 1510 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sema3aO08665 Hpca-209ENSMUST00000164649 1626 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Sema3aO08665 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Sema3aO08665 Tspan17-201ENSMUST00000026993 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Sema3aO08665 Maf1-211ENSMUST00000161527 1743 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
Sema3aO08665 Scarb1-202ENSMUST00000111390 2367 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sema3aO08665 1700034P13Rik-201ENSMUST00000181358 1343 ntTSL 1 (best) BASIC21.29■■□□□ 1
Sema3aO08665 Zfp579-201ENSMUST00000108572 2157 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
Sema3aO08665 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Tusc2-201ENSMUST00000010198 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Llph-202ENSMUST00000130198 1463 ntAPPRIS P1 TSL 3 BASIC21.28■■□□□ 1
Sema3aO08665 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC21.28■■□□□ 1
Sema3aO08665 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Tle1-205ENSMUST00000107337 2067 ntTSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Sema3aO08665 Fbxo4-201ENSMUST00000022791 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sema3aO08665 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
Sema3aO08665 Setd4-201ENSMUST00000023669 1816 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
Sema3aO08665 Mcoln1-201ENSMUST00000004683 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Sema3aO08665 D130058E05Rik-201ENSMUST00000173856 1372 ntTSL 2 BASIC21.27■■□□□ 1
Sema3aO08665 Psmg1-202ENSMUST00000117044 807 ntTSL 5 BASIC21.27■■□□□ 1
Sema3aO08665 Bloc1s5-202ENSMUST00000224115 1020 ntBASIC21.27■■□□□ 1
Sema3aO08665 Rab28-201ENSMUST00000031011 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema3aO08665 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema3aO08665 Mpzl1-202ENSMUST00000111435 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Sema3aO08665 Barx1-201ENSMUST00000021813 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema3aO08665 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema3aO08665 Gm18755-201ENSMUST00000218030 1099 ntBASIC21.25■□□□□ 0.99
Sema3aO08665 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC21.25■□□□□ 0.99
Sema3aO08665 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema3aO08665 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema3aO08665 Prss50-201ENSMUST00000051097 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Sema3aO08665 Hmbox1-204ENSMUST00000175905 1715 ntTSL 5 BASIC21.24■□□□□ 0.99
Sema3aO08665 Dus1l-209ENSMUST00000167023 1909 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema3aO08665 Dus1l-201ENSMUST00000026151 1930 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Sema3aO08665 Rnf187-201ENSMUST00000094151 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
Sema3aO08665 Gm5522-201ENSMUST00000189483 1242 ntBASIC21.24■□□□□ 0.99
Sema3aO08665 Tpm1-211ENSMUST00000113695 1607 ntTSL 3 BASIC21.24■□□□□ 0.99
Sema3aO08665 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sema3aO08665 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Sema3aO08665 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC21.23■□□□□ 0.99
Sema3aO08665 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Sema3aO08665 Gm13042-201ENSMUST00000119244 1955 ntBASIC21.23■□□□□ 0.99
Sema3aO08665 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema3aO08665 Prrt2-206ENSMUST00000202045 429 ntTSL 5 BASIC21.22■□□□□ 0.99
Sema3aO08665 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC21.22■□□□□ 0.99
Sema3aO08665 Tk2-205ENSMUST00000212275 1507 ntAPPRIS P1 TSL 2 BASIC21.22■□□□□ 0.99
Sema3aO08665 Alkal2-201ENSMUST00000067087 1509 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema3aO08665 AC164883.3-201ENSMUST00000227396 1774 ntBASIC21.22■□□□□ 0.99
Sema3aO08665 Nab1-201ENSMUST00000069792 3874 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Sema3aO08665 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sema3aO08665 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC21.21■□□□□ 0.99
Sema3aO08665 Gm10399-202ENSMUST00000202768 748 ntBASIC21.21■□□□□ 0.99
Sema3aO08665 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Sema3aO08665 Gimap1-201ENSMUST00000054368 1493 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 Sucla2-201ENSMUST00000022706 1545 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 Acsl6-209ENSMUST00000108904 2594 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 Gm15546-201ENSMUST00000122095 826 ntBASIC21.2■□□□□ 0.98
Sema3aO08665 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 Vwc2-201ENSMUST00000056344 1350 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 Slc9a7-202ENSMUST00000115393 2152 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 Glp1r-201ENSMUST00000114574 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Sema3aO08665 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sema3aO08665 Btbd17-201ENSMUST00000000206 1717 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sema3aO08665 Faim-202ENSMUST00000112911 803 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
Sema3aO08665 Txnrd2-201ENSMUST00000115604 1235 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Sema3aO08665 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC21.19■□□□□ 0.98
Sema3aO08665 H2-Q2-201ENSMUST00000074806 1262 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sema3aO08665 Tmem41a-201ENSMUST00000023562 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Sema3aO08665 Tarbp2-201ENSMUST00000023813 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms